Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P534T21 Lonicera japonica HOM05D003192 ORTHO05D003596 9.0e-97 357.1 199 100.0
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.9e-46 189.9 199 54.3
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 2.1e-45 186.4 199 53.3
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 6.1e-45 184.9 199 59.3
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 1.8e-44 183.3 199 53.3
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 1.8e-44 183.3 198 53.5
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 4.0e-44 182.2 197 53.8
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 1.5e-43 180.3 198 51.0
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.0e-43 179.9 197 52.3
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 4.4e-43 178.7 197 52.3
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 5.7e-43 178.3 199 53.8
MD01G1039400 Malus domestica HOM05D003192 ORTHO05D003596 6.3e-42 174.9 199 49.2
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 6.3e-42 174.9 199 50.3
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.4e-41 173.7 198 54.5
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 5.3e-41 171.8 199 48.2
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 7.0e-41 171.4 198 48.0
SGA_v2.0_scaffold115G32126 Striga asiatica HOM05D003192 ORTHO05D003596 9.1e-41 171.0 199 49.2
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 2.0e-40 169.9 199 53.8
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 3.5e-40 169.1 197 50.8
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 3.5e-40 169.1 183 53.0
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 4.5e-40 168.7 197 47.2
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 1.7e-39 166.8 197 46.7
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 1.7e-39 166.8 195 52.8
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 2.9e-39 166.0 197 46.7
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 3.8e-39 165.6 197 46.2
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 8.5e-39 164.5 199 49.2
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 8.5e-39 164.5 199 49.7
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 8.5e-39 164.5 199 50.8
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 8.5e-39 164.5 199 50.8
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 8.5e-39 164.5 196 52.6
PSO170G5608 Papaver somniferum HOM05D003192 ORTHO05D003596 8.5e-39 164.5 199 47.2
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 1.1e-38 164.1 197 45.7
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 1.1e-38 164.1 199 51.8
PSO210G4022 Papaver somniferum HOM05D003192 ORTHO05D003596 1.1e-38 164.1 199 47.2
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 4.2e-38 162.2 192 45.3
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 1.6e-37 160.2 198 46.0
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 1.6e-37 160.2 197 44.7
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 2.1e-37 159.8 197 47.2
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.7e-37 159.5 197 45.7
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 6.1e-37 158.3 197 44.7
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 6.1e-37 158.3 196 45.9
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 8.0e-37 157.9 199 49.7
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 8.0e-37 157.9 186 48.9
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 3.0e-36 156.0 197 49.7
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 4.0e-36 155.6 197 44.7
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 4.0e-36 155.6 199 49.7
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 4.0e-36 155.6 197 45.7
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 5.2e-36 155.2 197 42.6
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 5.2e-36 155.2 199 48.7
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.5e-35 153.7 199 49.2
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 3.4e-35 152.5 191 49.7
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 4.4e-35 152.1 197 42.6
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 1.3e-34 150.6 197 44.2
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 1.7e-34 150.2 197 47.2
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 2.8e-34 149.4 198 51.5
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 2.8e-34 149.4 199 49.2
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 3.7e-34 149.1 197 49.2
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 6.3e-34 148.3 197 45.2
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 6.3e-34 148.3 197 46.2
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 8.3e-34 147.9 199 43.2
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 3.1e-33 146.0 197 42.6
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 5.4e-33 145.2 196 43.4
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 5.4e-33 145.2 199 42.7
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 5.4e-33 145.2 197 47.2
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.2e-32 144.1 191 47.6
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 2.0e-32 143.3 199 45.2
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 2.0e-32 143.3 191 46.1
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.7e-32 142.9 197 44.7
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 3.5e-32 142.5 197 44.7
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 4.5e-32 142.1 196 42.9
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 4.5e-32 142.1 195 42.1
Lalb_Chr05g0228511 Lupinus albus HOM05D003192 ORTHO05D003596 1.0e-31 141.0 199 47.2
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 1.3e-31 140.6 197 42.1
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 1.3e-31 140.6 199 43.2
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 1.3e-31 140.6 168 52.4
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 1.7e-31 140.2 197 41.1
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea HOM05D003192 ORTHO05D003596 2.2e-31 139.8 197 42.1
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 3.8e-31 139.0 197 44.2
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 5.0e-31 138.7 187 44.9
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 5.0e-31 138.7 197 44.7
Actinidia02392 Actinidia chinensis HOM05D003192 ORTHO05D003596 6.5e-31 138.3 196 43.4
Peaxi162Scf00003g00329 Petunia axillaris HOM05D003192 ORTHO05D003596 6.5e-31 138.3 199 40.7
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 8.5e-31 137.9 199 42.7
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 1.1e-30 137.5 199 46.7
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 1.5e-30 137.1 162 53.1
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 1.9e-30 136.7 197 44.7
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 4.2e-30 135.6 199 44.2
Glyma.13G256600 Glycine max HOM05D003192 ORTHO05D003596 5.5e-30 135.2 197 41.1
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 5.5e-30 135.2 199 40.2
Atru.chr6.1263 Acer truncatum HOM05D003192 ORTHO05D003596 9.5e-30 134.4 199 40.7
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.2e-29 134.0 186 41.9
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.2e-29 134.0 197 40.1
Os03g0691500 Oryza sativa ssp. japonica HOM05D003192 ORTHO05D003596 1.6e-29 133.7 196 40.8
HPP92_014211 Vanilla planifolia HOM05D003192 ORTHO05D003596 1.6e-29 133.7 198 41.9
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 2.8e-29 132.9 198 46.0
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 3.6e-29 132.5 199 46.7
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 4.7e-29 132.1 188 42.0
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 8.0e-29 131.3 204 41.7
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 8.0e-29 131.3 196 45.4
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 1.4e-28 130.6 164 47.6
SGA_v2.0_scaffold83G26376 Striga asiatica HOM05D003192 ORTHO05D003596 1.4e-28 130.6 199 38.7
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 1.8e-28 130.2 199 38.2
HanXRQChr10g0289971 Helianthus annuus HOM05D003192 ORTHO05D003596 2.3e-28 129.8 188 41.5
Manes.10G098500 Manihot esculenta HOM05D003192 ORTHO05D003596 2.3e-28 129.8 195 40.5
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 4.0e-28 129.0 199 37.7
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 6.8e-28 128.3 197 43.7
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 8.8e-28 127.9 199 44.7
DCAR_021912 Daucus carota HOM05D003192 ORTHO05D003596 1.5e-27 127.1 195 44.1
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 1.5e-27 127.1 197 39.1
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.0e-27 126.7 197 39.1
Nitab4.5_0008998g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 2.0e-27 126.7 197 40.6
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 3.4e-27 125.9 181 48.6
ECA238G4297 Erigeron canadensis HOM05D003192 ORTHO05D003596 5.7e-27 125.2 197 44.2
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 5.7e-27 125.2 192 46.4
HanXRQChr11g0346961 Helianthus annuus HOM05D003192 ORTHO05D003596 5.7e-27 125.2 196 45.4
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 5.7e-27 125.2 195 47.2
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 2.2e-26 123.2 197 46.2
MSTRG.20280 Avicennia marina HOM05D003192 ORTHO05D003596 2.8e-26 122.9 199 37.7
Medtr8g471150 Medicago truncatula HOM05D003192 ORTHO05D003596 3.7e-26 122.5 199 44.2
Sc08g0003910 Simmondsia chinensis HOM05D003192 ORTHO05D003596 3.7e-26 122.5 199 34.7
ECA234G2607 Erigeron canadensis HOM05D003192 ORTHO05D003596 4.9e-26 122.1 199 38.7
Psat1g214080 Pisum sativum HOM05D003192 ORTHO05D003596 6.3e-26 121.7 197 36.5
PGSC0003DMG400037454 Solanum tuberosum HOM05D003192 ORTHO05D003596 8.3e-26 121.3 199 35.7
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 1.1e-25 120.9 198 36.4
VMungo0299G0001 Vigna mungo HOM05D003192 ORTHO05D003596 1.1e-25 120.9 197 38.1
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 2.4e-25 119.8 197 40.6
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 4.1e-25 119.0 197 41.1
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 7.0e-25 118.2 197 38.6
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 1.2e-24 117.5 199 36.2
Migut.K00798 Erythranthe guttata HOM05D003192 ORTHO05D003596 1.2e-24 117.5 301 33.2
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.6e-24 117.1 197 41.6
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 1.6e-24 117.1 192 44.3
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 3.5e-24 115.9 184 38.0
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 5.9e-24 115.2 186 45.7
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla HOM05D003192 ORTHO05D003596 1.0e-23 114.4 189 38.6
RcHm_v2.0_Chr6g0271001 Rosa chinensis HOM05D003192 ORTHO05D003596 1.0e-23 114.4 197 42.6
Zm00001eb053540 Zea mays HOM05D003192 ORTHO05D003596 1.0e-23 114.4 197 36.0
ECA233G2454 Erigeron canadensis HOM05D000169 ORTHO05D003596 1.3e-23 114.0 197 39.1
Lsat_1_v5_gn_2_70360 Lactuca sativa HOM05D003192 ORTHO05D003596 5.0e-23 112.1 191 44.0
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 1.5e-22 110.5 199 42.7
PSO782G1877 Papaver somniferum HOM05D003192 ORTHO05D003596 1.9e-22 110.2 198 43.9
PSO063G1758 Papaver somniferum HOM05D003192 ORTHO05D003596 4.3e-22 109.0 198 44.9
Phvul.006G201900 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 9.5e-22 107.8 189 34.9
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 3.6e-21 105.9 185 38.9
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 3.6e-21 105.9 162 39.5
FvH4_2g11711 Fragaria vesca HOM05D003192 ORTHO05D003596 1.4e-20 104.0 197 42.1
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 6.8e-20 101.7 197 35.5
SEGI_05807 Sequoiadendron giganteum HOM05D003192 ORTHO05D003596 1.2e-19 100.9 253 30.8
Zm00001eb217110 Zea mays HOM05D003192 ORTHO05D003596 1.2e-19 100.9 195 34.4
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 7.5e-19 98.2 197 40.6
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 9.8e-19 97.8 167 41.3
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 2.2e-18 96.7 168 41.1
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 2.2e-18 96.7 98 49.0
Lalb_Chr20g0122921 Lupinus albus HOM05D003192 ORTHO05D003596 1.4e-17 94.0 206 34.0
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 2.4e-17 93.2 98 49.0
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 1.6e-16 90.5 182 35.7
Phvul.002G147100 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 2.0e-16 90.1 197 39.1
HPP92_026470 Vanilla planifolia HOM05D003192 ORTHO05D003596 7.8e-16 88.2 198 34.3
AUR62017973 Chenopodium quinoa HOM05D003192 ORTHO05D003596 2.3e-15 86.7 165 37.6
AUR62003664 Chenopodium quinoa HOM05D003192 ORTHO05D003596 3.0e-15 86.3 169 40.2
Lalb_Chr05g0216371 Lupinus albus HOM05D003192 ORTHO05D003596 6.6e-15 85.1 199 34.2
ATR0767G239 Amborella trichopoda HOM05D003192 ORTHO05D003596 1.5e-14 84.0 254 27.2
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 3.6e-13 79.3 197 32.0
Ah.01g023960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 1.1e-12 77.8 191 33.0
Dinv36931 Davidia involucrata HOM05D003192 ORTHO05D003596 1.8e-12 77.0 186 34.9
Ah.02g123570 Amaranthus hybridus HOM05D003192 ORTHO05D003596 4.0e-12 75.9 144 37.5
Ca_22705_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 4.0e-12 75.9 199 33.2
Dinv20194 Davidia involucrata HOM05D003192 ORTHO05D003596 4.0e-12 75.9 167 34.1
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 5.2e-12 75.5 60 61.7
Ah.03g139960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 3.4e-11 72.8 145 35.9
Lsat_1_v5_gn_5_109820 Lactuca sativa HOM05D003192 ORTHO05D003596 7.5e-11 71.6 61 55.7
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 1.7e-10 70.5 63 57.1
EL10Ac6g15204 Beta vulgaris HOM05D003192 ORTHO05D003596 1.9e-09 67.0 174 36.8
VMungo1215G1834 Vigna mungo HOM05D003192 ORTHO05D003596 1.9e-09 67.0 197 33.5
Oeu063542.1 Olea europaea HOM05D003192 ORTHO05D003596 1.9e-06 57.0 108 38.0
arahy.Tifrunner.gnm1.ann1.ND4N8X Arachis hypogaea HOM05D003192 ORTHO05D003596 7.3e-06 55.1 174 31.6
arahy.Tifrunner.gnm1.ann1.QT15T4 Arachis hypogaea HOM05D003192 ORTHO05D003596 7.3e-06 55.1 174 31.6


User provided reference genes

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