Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P476T21 Lonicera japonica HOM05D013013 ORTHO05D000002 2.1e-106 389.0 192 100.0
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 3.0e-33 146.0 131 53.4
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 1.8e-30 136.7 129 51.2
Lj2C32T8 Lonicera japonica HOM05D000004 ORTHO05D000002 9.1e-30 134.4 120 52.5
Lj4C52G8 Lonicera japonica HOM05D013013 ORTHO05D000002 2.2e-28 129.8 129 49.6
Lj4P831T53 Lonicera japonica HOM05D013013 ORTHO05D000002 8.5e-28 127.9 105 55.2
Lj3P133T15 Lonicera japonica HOM05D000004 ORTHO05D000002 9.8e-24 114.4 112 50.0
Lj7C565T3 Lonicera japonica HOM05D000004 ORTHO05D000002 1.4e-22 110.5 84 57.1
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 1.8e-22 110.2 90 52.2
Lj5P794T25 Lonicera japonica HOM05D000004 ORTHO05D000002 5.0e-20 102.1 127 40.2
Lj6C451T1 Lonicera japonica HOM05D000004 ORTHO05D000002 6.6e-20 101.7 131 40.5
Lj7P201T6 Lonicera japonica HOM05D000004 ORTHO05D000002 1.5e-19 100.5 116 43.1
Lj6C267T0 Lonicera japonica HOM05D000004 ORTHO05D000002 3.3e-19 99.4 112 43.8
Lj5C8G3 Lonicera japonica HOM05D000004 ORTHO05D000002 2.8e-18 96.3 101 48.5
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 1.0e-17 94.4 120 36.7
Lj2A890T24 Lonicera japonica HOM05D000004 ORTHO05D000002 5.2e-17 92.0 116 37.9
Lj5C834G3 Lonicera japonica HOM05D000004 ORTHO05D000002 2.0e-16 90.1 129 37.2
Lj4C143T12 Lonicera japonica HOM05D000004 ORTHO05D000002 3.4e-16 89.4 102 43.1
Lju41C59T6 Lonicera japonica HOM05D000004 ORTHO05D000002 3.4e-16 89.4 94 45.7
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 4.4e-16 89.0 131 33.6
Lj5P835T19 Lonicera japonica HOM05D000004 ORTHO05D000002 7.5e-16 88.2 129 36.4
Lj7P562T16 Lonicera japonica HOM05D000004 ORTHO05D000002 2.2e-15 86.7 120 35.8
Lj8C412T6 Lonicera japonica HOM05D000004 ORTHO05D000002 2.8e-15 86.3 76 47.4
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.7e-13 79.7 118 33.1
Lj1C1172G2 Lonicera japonica HOM05D000004 ORTHO05D000002 3.5e-13 79.3 94 45.7
Lj3C585T21 Lonicera japonica HOM05D013013 ORTHO05D000002 5.9e-13 78.6 56 67.9
Lj3P77T28 Lonicera japonica HOM05D013013 ORTHO05D000002 7.8e-13 78.2 85 47.1
Lj5P589G12 Lonicera japonica HOM05D013013 ORTHO05D000002 1.0e-12 77.8 139 39.6
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-12 76.3 118 34.7
PSO675G5742 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-11 72.8 123 34.1
Lju470C18T4 Lonicera japonica HOM05D000004 ORTHO05D000002 2.1e-10 70.1 86 40.7
PSO210G0561 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-10 70.1 116 31.9
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-10 70.1 122 31.1
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.8e-10 69.7 115 31.3
PSO781G0049 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-10 68.9 116 32.8
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 8.0e-10 68.2 118 30.5
PSO541G6020 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-09 67.0 125 34.4
PSO832G0727 Papaver somniferum HOM05D000004 ORTHO05D000002 8.9e-09 64.7 118 33.1
Os02g0566300 Oryza sativa ssp. japonica HOM05D044779 ORTHO05D000002 1.2e-08 64.3 87 33.3
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-08 63.5 131 30.5
Sopen10g028470 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-08 63.2 119 31.1
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 3.4e-08 62.8 118 29.7
Lj8C417T6 Lonicera japonica HOM05D013013 ORTHO05D000002 4.4e-08 62.4 50 52.0
Lj6C594G31 Lonicera japonica HOM05D000004 ORTHO05D000002 7.5e-08 61.6 123 32.5
PSO832G4329 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.8 97 33.0
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.2e-07 60.1 127 29.1
Lj2C123T7 Lonicera japonica HOM05D013013 ORTHO05D000002 2.9e-07 59.7 53 52.8
PSO210G6199 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 59.7 122 30.3
Lj5C99T13 Lonicera japonica HOM05D013013 ORTHO05D000002 4.9e-07 58.9 53 52.8
PSO339G1563 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-07 58.9 122 29.5
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 8.3e-07 58.2 121 30.6
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 115 30.4
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 119 29.4
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 119 29.4
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 1.9e-06 57.0 128 28.1
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-06 56.6 111 32.4
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 5.4e-06 55.5 119 28.6
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 7.0e-06 55.1 101 30.7
Ah.12g061050 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.0e-06 55.1 106 29.2
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 9.2e-06 54.7 126 31.0
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 9.2e-06 54.7 126 31.7
PSO675G5431 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-06 54.7 188 25.0
TPR.G37411 Trifolium pratense HOM05D000004 ORTHO05D000002 9.2e-06 54.7 123 30.1


User provided reference genes

Program Settings