Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P447T23 Lonicera japonica HOM05D014440 ORTHO05D000167 7.0e-83 310.5 144 100.0
Lj8P222T10 Lonicera japonica HOM05D014440 ORTHO05D000167 5.2e-46 188.0 108 78.7
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 1.2e-26 123.6 142 39.4
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 2.6e-21 105.9 131 36.6
Lj5P296T4 Lonicera japonica HOM05D000003 ORTHO05D000004 1.1e-19 100.5 117 38.5
Lj7P99T38 Lonicera japonica HOM05D014440 ORTHO05D000167 1.6e-18 96.7 122 33.6
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-16 88.2 121 33.1
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-15 87.0 124 28.2
Lj2P99T51 Lonicera japonica HOM05D014440 ORTHO05D000167 3.6e-15 85.5 103 36.9
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-15 84.3 124 27.4
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-14 84.0 121 30.6
Lj5C295T1 Lonicera japonica HOM05D014440 ORTHO05D000167 1.8e-14 83.2 103 36.9
CANSAT01G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-14 82.8 124 26.6
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 4.0e-14 82.0 139 28.1
Lj3C1061G3 Lonicera japonica HOM05D000434 ORTHO05D001445 9.0e-14 80.9 107 29.9
Lj3P924T30 Lonicera japonica HOM05D021412 ORTHO05D000167 9.0e-14 80.9 103 36.9
Lju3824P0T16 Lonicera japonica HOM05D014440 ORTHO05D000004 1.5e-13 80.1 84 39.3
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-13 79.7 137 29.2
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-13 79.3 134 29.1
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 2.6e-13 79.3 109 30.3
Nitab4.5_0006377g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000167 3.4e-13 79.0 132 29.5
CANSAT56G4532 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-12 76.3 137 29.9
Lj3P442T6 Lonicera japonica HOM05D000003 ORTHO05D000004 3.8e-12 75.5 117 30.8
Lj7C520T4 Lonicera japonica HOM05D000003 ORTHO05D000004 4.9e-12 75.1 120 27.5
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 4.9e-12 75.1 140 26.4
CANSAT78G1090 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-12 74.7 135 28.9
CANSAT11G1211 Cannabis sativa HOM05D000003 ORTHO05D000167 8.4e-12 74.3 137 28.5
CANSAT54G2007 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-11 73.9 118 29.7
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-11 73.9 132 25.8
CANSAT80G0435 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-11 73.2 124 26.6
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 1.9e-11 73.2 103 31.1
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.9e-11 73.2 119 25.2
CANSAT25G3211 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-11 72.8 118 28.8
CANSAT78G2359 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-11 72.8 126 27.8
CANSAT80G2836 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-11 72.0 134 26.9
CANSAT11G0945 Cannabis sativa HOM05D000003 ORTHO05D000167 5.4e-11 71.6 144 27.1
Lj2P267T18 Lonicera japonica HOM05D000003 ORTHO05D000167 7.1e-11 71.2 98 31.6
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-10 70.1 120 28.3
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-10 69.7 122 23.8
CANSAT64G2653 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-10 69.3 122 24.6
CANSAT54G3006 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-10 68.9 118 25.4
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 6.0e-10 68.2 119 25.2
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-10 68.2 117 24.8
CANSAT56G4021 Cannabis sativa HOM05D000003 ORTHO05D000167 6.0e-10 68.2 122 24.6
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 6.0e-10 68.2 110 28.2
Manes.03G022751 Manihot esculenta HOM05D000003 ORTHO05D000004 6.0e-10 68.2 122 27.0
CANSAT01G0864 Cannabis sativa HOM05D000003 ORTHO05D000167 7.9e-10 67.8 132 25.0
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-10 67.8 120 26.7
CANSAT64G0189 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-10 67.8 121 27.3
CANSAT56G3244 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-09 67.0 114 28.9
CANSAT64G0723 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-09 67.0 117 26.5
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 1.8e-09 66.6 104 26.0
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-09 66.2 122 24.6
CANSAT56G2172 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-09 65.9 127 25.2
CANSAT78G1083 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-09 65.5 128 24.2
Lj2P545T25 Lonicera japonica HOM05D057521 ORTHO05D025757 3.9e-09 65.5 71 38.0
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-09 65.1 135 25.9
CANSAT56G4436 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-09 65.1 119 24.4
CANSAT21G1260 Cannabis sativa HOM05D000003 ORTHO05D000167 6.7e-09 64.7 118 26.3
CANSAT64G0262 Cannabis sativa HOM05D000003 ORTHO05D000167 6.7e-09 64.7 111 28.8
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 63.9 102 27.5
CANSAT25G2489 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-08 63.9 117 26.5
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 63.5 116 23.3
CANSAT78G0093 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 63.5 141 27.0
CANSAT25G1903 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-08 63.2 107 27.1
Lj1C134T2 Lonicera japonica HOM05D000003 ORTHO05D000167 1.9e-08 63.2 91 27.5
CANSAT78G1445 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-08 62.8 132 27.3
CANSAT80G0189 Cannabis sativa HOM05D000003 ORTHO05D000167 3.3e-08 62.4 121 24.0
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-08 62.4 119 26.9
TPR.G22171 Trifolium pratense HOM05D000147 ORTHO05D004093 3.3e-08 62.4 118 27.1
CANSAT64G2179 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-08 62.0 132 25.0
QL03p019159 Quercus lobata HOM05D008417 ORTHO05D010741 4.3e-08 62.0 137 27.0
CANSAT25G0172 Cannabis sativa HOM05D000003 ORTHO05D000167 7.4e-08 61.2 122 25.4
CANSAT54G1106 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-08 60.8 96 31.2
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 9.6e-08 60.8 91 34.1
CANSAT35G1149 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.5 138 23.9
CANSAT78G1505 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-07 60.5 115 25.2
Lj3P533T26 Lonicera japonica HOM05D021412 ORTHO05D025757 1.3e-07 60.5 79 32.9
Lj7C739T7 Lonicera japonica HOM05D000040 ORTHO05D001305 1.6e-07 60.1 61 37.7
Lj1P807T13 Lonicera japonica HOM05D014440 ORTHO05D000167 2.1e-07 59.7 81 32.1
CANSAT54G2656 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 58.9 85 31.8
CANSAT78G0561 Cannabis sativa HOM05D000003 ORTHO05D000167 3.7e-07 58.9 125 22.4
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 3.7e-07 58.9 112 29.5
PSO170G0726 Papaver somniferum HOM05D000003 ORTHO05D001026 3.7e-07 58.9 116 28.4
CANSAT80G0065 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-07 58.5 114 28.9
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 4.8e-07 58.5 59 40.7
Lj3A64T8 Lonicera japonica HOM05D014440 ORTHO05D025757 8.1e-07 57.8 107 29.0
PSO782G5668 Papaver somniferum HOM05D007979 ORTHO05D008897 8.1e-07 57.8 114 30.7
CANSAT56G0362 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.0 107 23.4
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 56.6 95 27.4
CANSAT01G0940 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 56.6 87 29.9
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 1.8e-06 56.6 109 22.9
RcHm_v2.0_Chr3g0481921 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.6 97 25.8
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 2.4e-06 56.2 95 24.2
Lj6P694T36 Lonicera japonica HOM05D021412 ORTHO05D000167 2.4e-06 56.2 60 36.7
PSO170G5786 Papaver somniferum HOM05D007979 ORTHO05D008897 3.1e-06 55.8 101 32.7
CANSAT56G3497 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-06 55.5 115 26.1
PSO541G4818 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 117 25.6
CANSAT54G1953 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-06 55.1 117 25.6
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 6.9e-06 54.7 116 24.1
CANSAT35G0956 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-06 54.3 139 26.6
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 9.0e-06 54.3 96 29.2
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 9.0e-06 54.3 119 26.1


User provided reference genes

Program Settings