Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P419T27 Lonicera japonica HOM05D008338 ORTHO05D000921 5.5e-56 220.7 110 100.0
Lj9A689T48 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-44 182.6 109 85.3
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 3.5e-42 174.9 109 79.8
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 3.9e-41 171.4 108 79.6
Lj7A576T77 Lonicera japonica HOM05D008338 ORTHO05D000921 5.0e-41 171.0 109 78.0
Lju1040A2T29 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-40 169.9 109 78.0
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 3.3e-40 168.3 108 78.7
Lj4P771T23 Lonicera japonica HOM05D008338 ORTHO05D000921 4.3e-40 167.9 106 80.2
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 1.2e-39 166.4 109 76.1
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 2.8e-39 165.2 109 74.3
Lj4C727T6 Lonicera japonica HOM05D008338 ORTHO05D000921 8.0e-39 163.7 108 76.9
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 8.9e-38 160.2 109 73.4
Lj2P1171T5 Lonicera japonica HOM05D008338 ORTHO05D000921 5.8e-37 157.5 109 73.4
Lj9P576T20 Lonicera japonica HOM05D008338 ORTHO05D000921 1.9e-35 152.5 102 71.6
Lj2A483T24 Lonicera japonica HOM05D008338 ORTHO05D000921 3.3e-32 141.7 87 80.5
Lj5A436T25 Lonicera japonica HOM05D008338 ORTHO05D000921 2.3e-30 135.6 76 89.5
Lj4A312T9 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-28 129.8 84 78.6
Lj2C925G1 Lonicera japonica HOM05D008338 ORTHO05D000921 3.2e-27 125.2 109 64.2
Lj7A78G56 Lonicera japonica HOM05D008338 ORTHO05D000921 1.6e-26 122.9 71 81.7
Lj2A609T18 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-25 119.4 71 80.3
Lj4P890T11 Lonicera japonica HOM05D008338 ORTHO05D000921 5.1e-25 117.9 84 72.6
Lj5A412T16 Lonicera japonica HOM05D008338 ORTHO05D000921 6.6e-25 117.5 71 78.9
Lj7A613T70 Lonicera japonica HOM05D008338 ORTHO05D000921 1.9e-24 115.9 71 78.9
Lj1P813T6 Lonicera japonica HOM05D008338 ORTHO05D000921 8.9e-22 107.1 70 75.7
Lj2A728G9 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-19 100.1 70 67.1
Lj4A628T58 Lonicera japonica HOM05D008338 ORTHO05D000921 9.0e-14 80.5 48 81.2
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 4.4e-13 78.2 102 41.2
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 7.6e-13 77.4 102 40.2
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.9e-13 77.0 102 39.2
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 9.9e-13 77.0 104 39.4
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.7e-12 76.3 90 44.4
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.2e-12 75.9 99 37.4
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 2.9e-12 75.5 102 38.2
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.9e-12 75.5 99 37.4
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 3.8e-12 75.1 105 39.0
Lj1A889T103 Lonicera japonica HOM05D008338 ORTHO05D000921 5.4e-11 71.2 48 72.9
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 9.3e-11 70.5 100 36.0
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 9.3e-11 70.5 100 36.0
Lj8P612T5 Lonicera japonica HOM05D008338 ORTHO05D000921 1.2e-10 70.1 56 62.5
Medtr3g065345 Medicago truncatula HOM05D008338 ORTHO05D000921 2.1e-10 69.3 85 38.8
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 2.7e-10 68.9 101 34.7
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 6.0e-10 67.8 100 35.0
Lj5A414T29 Lonicera japonica HOM05D008338 ORTHO05D000921 6.0e-10 67.8 54 59.3
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 7.8e-10 67.4 101 34.7
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.3e-09 66.6 102 35.3
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.3e-09 66.6 105 32.4
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-09 66.6 105 32.4
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.7e-09 66.2 66 48.5
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 2.3e-09 65.9 103 35.9
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 3.0e-09 65.5 105 31.4
Rhsim02G0174000 Rhododendron simsii HOM05D021294 ORTHO05D000921 3.9e-09 65.1 110 32.7
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 5.1e-09 64.7 92 35.9
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 5.1e-09 64.7 92 35.9
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 8.7e-09 63.9 91 38.5
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 8.7e-09 63.9 66 45.5
Psat5g151680 Pisum sativum HOM05D000665 ORTHO05D000921 1.1e-08 63.5 73 41.1
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 1.1e-08 63.5 73 41.1
Psat7g176640 Pisum sativum HOM05D000665 ORTHO05D000921 1.1e-08 63.5 73 41.1
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.5e-08 63.2 102 33.3
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-08 63.2 83 32.5
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.9e-08 62.8 91 33.0
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.9e-08 62.8 102 37.3
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.9e-08 62.8 109 33.0
Psat0s94g0040 Pisum sativum HOM05D000665 ORTHO05D000921 1.9e-08 62.8 76 40.8
CSS0009593 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.5e-08 62.4 90 34.4
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-08 62.4 102 34.3
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 2.5e-08 62.4 72 38.9
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 2.5e-08 62.4 104 32.7
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 2.5e-08 62.4 104 32.7
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 2.5e-08 62.4 102 34.3
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-08 62.4 94 36.2
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 2.5e-08 62.4 104 33.7
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 3.3e-08 62.0 105 31.4
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 3.3e-08 62.0 104 32.7
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-08 61.2 76 35.5
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 76 35.5
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 83 31.3
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 94 35.1
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 94 35.1
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 94 35.1
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-08 60.8 76 35.5
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 7.3e-08 60.8 90 32.2
Psat5g276600 Pisum sativum HOM05D003171 ORTHO05D000921 9.6e-08 60.5 73 39.7
Psat7g003000 Pisum sativum HOM05D000665 ORTHO05D000921 9.6e-08 60.5 73 38.4
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 9.6e-08 60.5 100 37.0
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 9.6e-08 60.5 91 35.2
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-08 60.5 76 34.2
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-08 60.5 78 35.9
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-08 60.5 98 34.7
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-08 60.5 98 34.7
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 9.6e-08 60.5 103 36.9
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 9.6e-08 60.5 103 36.9
TPR.G10504 Trifolium pratense HOM05D000665 ORTHO05D000921 9.6e-08 60.5 93 33.3
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-07 60.1 104 36.5
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.3e-07 60.1 77 40.3
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-07 59.7 76 34.2
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-07 59.7 76 34.2
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-07 59.7 76 34.2
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 1.6e-07 59.7 96 32.3
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-07 59.7 92 33.7
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-07 59.3 94 35.1
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-07 59.3 83 31.3
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-07 59.3 94 36.2
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-07 59.3 83 31.3
Rhsim07G0109100 Rhododendron simsii HOM05D021294 ORTHO05D000921 2.1e-07 59.3 100 34.0
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.8e-07 58.9 92 32.6
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.8e-07 58.9 92 32.6
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 2.8e-07 58.9 104 35.6
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 2.8e-07 58.9 59 47.5
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 2.8e-07 58.9 76 34.2
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 3.6e-07 58.5 59 45.8
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 3.6e-07 58.5 94 34.0
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 4.8e-07 58.2 92 31.5
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-07 57.4 93 34.4
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.1e-06 57.0 76 38.2
Lj3A649T63 Lonicera japonica HOM05D008338 ORTHO05D000921 1.4e-06 56.6 47 59.6
Lj2A1212T63 Lonicera japonica HOM05D008338 ORTHO05D000921 1.8e-06 56.2 47 61.7
TPR.G32241 Trifolium pratense HOM05D000984 ORTHO05D000921 1.8e-06 56.2 87 32.2
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 1.8e-06 56.2 102 31.4
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.4e-06 55.8 101 28.7
Lj2C391G3 Lonicera japonica HOM05D008338 ORTHO05D000921 2.4e-06 55.8 109 35.8
vmacro16933 Vaccinium macrocarpon HOM05D003171 ORTHO05D000037 2.4e-06 55.8 107 30.8
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.1e-06 55.5 100 29.0
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 3.1e-06 55.5 62 43.5
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 3.1e-06 55.5 94 31.9
CSS0011559 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.0e-06 55.1 63 44.4
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 4.0e-06 55.1 61 42.6
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 4.0e-06 55.1 89 31.5
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.3e-06 54.7 72 40.3
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.9e-06 54.3 92 30.4
COL.COLO4_13504 Corchorus olitorius HOM05D000665 ORTHO05D000140 6.9e-06 54.3 89 27.0
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 6.9e-06 54.3 102 31.4
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 9.0e-06 53.9 91 29.7
Lj1C822T3 Lonicera japonica HOM05D008338 ORTHO05D000921 9.0e-06 53.9 33 72.7
PGR142G3438 Punica granatum HOM05D003171 ORTHO05D000921 9.0e-06 53.9 97 29.9
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 9.0e-06 53.9 92 31.5


User provided reference genes

Program Settings