Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P366T41 Lonicera japonica HOM05D004474 ORTHO05D005538 8.0e-40 166.8 93 100.0
Dinv14299 Davidia involucrata HOM05D004474 ORTHO05D005538 8.9e-23 110.2 90 71.1
Dinv24073 Davidia involucrata HOM05D004474 ORTHO05D005538 4.1e-20 101.3 91 65.9
Hma1.2p1_0676F.1_g201960 Hydrangea macrophylla HOM05D004474 ORTHO05D005538 1.6e-19 99.4 87 67.8
Actinidia17270 Actinidia chinensis HOM05D004474 ORTHO05D005538 1.1e-15 86.7 88 63.6
Actinidia38580 Actinidia chinensis HOM05D004474 ORTHO05D005538 1.4e-15 86.3 88 63.6
CSS0036713 Camellia sinensis var. sinensis HOM05D004474 ORTHO05D005538 1.4e-12 76.3 87 62.1
Hund24791 Selenicereus undatus HOM05D004474 ORTHO05D005538 5.1e-10 67.8 85 49.4
Rhsim04G0096800 Rhododendron simsii HOM05D004474 ORTHO05D005538 8.7e-10 67.0 92 54.3
RhsimUnG0212600 Rhododendron simsii HOM05D004474 ORTHO05D005538 8.7e-10 67.0 92 54.3
ECA236G1848 Erigeron canadensis HOM05D004474 ORTHO05D005538 1.5e-09 66.2 80 57.5
TAR636G3262 Trochodendron aralioides HOM05D004474 ORTHO05D005538 1.9e-09 65.9 92 52.2
Lsat_1_v5_gn_8_75341 Lactuca sativa HOM05D004474 ORTHO05D005538 3.3e-09 65.1 86 53.5
FAN05G0702 Fragaria x ananassa HOM05D004474 ORTHO05D005538 3.6e-08 61.6 64 57.8
Haze_19989 Corylus avellana HOM05D004474 ORTHO05D005538 4.8e-08 61.2 89 49.4
EL10Ac3g06918 Beta vulgaris HOM05D004474 ORTHO05D005538 6.2e-08 60.8 87 46.0
Cfa020166 Carpinus fangiana HOM05D004474 ORTHO05D005538 6.2e-08 60.8 89 50.6
TWI74G1538 Tripterygium wilfordii HOM05D004474 ORTHO05D005538 6.2e-08 60.8 68 57.4
Atru.chr8.1110 Acer truncatum HOM05D004474 ORTHO05D005538 1.4e-07 59.7 84 52.4
Haze_19987 Corylus avellana HOM05D004474 ORTHO05D005538 1.4e-07 59.7 89 48.3
CANSAT64G2813 Cannabis sativa HOM05D004474 ORTHO05D005538 1.8e-07 59.3 87 51.7
DCAR_013545 Daucus carota HOM05D004474 ORTHO05D005538 4.0e-07 58.2 88 51.1
FAN09G2770 Fragaria x ananassa HOM05D004474 ORTHO05D005538 5.3e-07 57.8 63 57.1
FvH4_6g22380 Fragaria vesca HOM05D004474 ORTHO05D005538 6.9e-07 57.4 62 56.5
FAN14G3363 Fragaria x ananassa HOM05D004474 ORTHO05D005538 6.9e-07 57.4 62 56.5
HanXRQChr06g0176171 Helianthus annuus HOM05D004474 ORTHO05D005538 6.9e-07 57.4 86 50.0
CiPaw.10G026600 Carya illinoinensis HOM05D004474 ORTHO05D005538 1.2e-06 56.6 92 47.8
AUR62015371 Chenopodium quinoa HOM05D004474 ORTHO05D005538 1.2e-06 56.6 88 50.0
Aqoxy2G00079 Aquilegia oxysepala HOM05D004474 ORTHO05D005538 1.5e-06 56.2 87 48.3
FAN02G3755 Fragaria x ananassa HOM05D004474 ORTHO05D005538 2.0e-06 55.8 62 56.5
Nn2g15677 Nelumbo nucifera HOM05D004474 ORTHO05D005538 2.0e-06 55.8 75 53.3
Nitab4.5_0007056g0010 Nicotiana tabacum HOM05D004474 ORTHO05D005538 2.0e-06 55.8 92 48.9
Ah.04g152460 Amaranthus hybridus HOM05D004474 ORTHO05D005538 2.6e-06 55.5 78 47.4
CiPaw.09G030400 Carya illinoinensis HOM05D004474 ORTHO05D005538 2.6e-06 55.5 70 52.9
AUR62012033 Chenopodium quinoa HOM05D004474 ORTHO05D005538 2.6e-06 55.5 88 46.6
Ciclev10012319m.g Citrus clementina HOM05D004474 ORTHO05D005538 2.6e-06 55.5 87 49.4
Solyc03g062790.3 Solanum lycopersicum HOM05D004474 ORTHO05D005538 2.6e-06 55.5 87 49.4
SGA_v2.0_scaffold274G46485 Striga asiatica HOM05D004474 ORTHO05D005538 2.6e-06 55.5 48 62.5
ClCG10G017510 Citrullus lanatus HOM05D004474 ORTHO05D005538 3.4e-06 55.1 82 50.0
MD12G1057400 Malus domestica HOM05D004474 ORTHO05D005538 4.4e-06 54.7 65 56.9
Sabra06G0147300 Salix brachista HOM05D004474 ORTHO05D005538 4.4e-06 54.7 84 48.8
Potri.006G192200 Populus trichocarpa HOM05D004474 ORTHO05D005538 5.8e-06 54.3 81 49.4
Sopen03g015120 Solanum pennellii HOM05D004474 ORTHO05D005538 7.6e-06 53.9 87 49.4
CDE02G4436 Ceratophyllum demersum HOM05D004474 ORTHO05D005538 9.9e-06 53.5 81 45.7


User provided reference genes

Program Settings