Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.7e-67 259.2 132 100.0
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.1e-45 186.8 124 73.4
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.1e-45 186.8 119 73.1
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 4.0e-45 184.9 131 70.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.6e-44 182.2 128 70.3
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 4.5e-44 181.4 116 72.4
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.6e-44 180.6 120 71.7
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.3e-43 179.9 128 69.5
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.3e-43 179.9 123 75.6
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.2e-43 179.1 120 70.8
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 3.8e-43 178.3 120 71.7
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.4e-42 176.4 132 64.4
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.2e-42 174.9 132 63.6
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.2e-42 174.9 132 63.6
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.2e-41 173.3 108 75.9
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.7e-41 172.2 109 74.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 4.6e-41 171.4 132 61.4
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.0e-40 170.2 109 76.1
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.3e-40 169.9 134 62.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.8e-40 169.5 109 76.1
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 3.0e-40 168.7 115 73.9
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 3.0e-40 168.7 109 76.1
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 3.9e-40 168.3 135 62.2
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 6.7e-40 167.5 132 58.3
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.1e-39 166.8 109 72.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.5e-39 165.6 112 72.3
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.5e-39 165.6 125 63.2
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 3.3e-39 165.2 114 67.5
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 4.3e-39 164.9 122 63.1
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.3e-38 163.3 122 63.1
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.3e-38 163.3 122 63.1
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.3e-38 163.3 129 61.2
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.6e-38 162.9 130 64.6
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.2e-38 162.5 118 64.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 2.8e-38 162.2 96 81.2
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.8e-38 162.2 111 67.6
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 2.8e-38 162.2 113 68.1
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 2.8e-38 162.2 115 64.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 3.7e-38 161.8 111 68.5
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.7e-38 161.8 122 60.7
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.8e-38 161.4 114 69.3
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 8.2e-38 160.6 111 67.6
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-37 160.2 123 60.2
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.1e-37 160.2 112 68.8
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.4e-37 159.1 133 61.7
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 2.4e-37 159.1 109 71.6
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.4e-37 159.1 112 68.8
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.1e-37 158.7 129 58.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 3.1e-37 158.7 129 59.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 4.1e-37 158.3 128 60.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.9e-37 157.5 129 58.1
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 6.9e-37 157.5 116 62.9
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 9.0e-37 157.1 106 75.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 9.0e-37 157.1 108 65.7
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.5e-36 156.4 132 61.4
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.5e-36 156.4 100 70.0
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.0e-36 156.0 109 68.8
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.6e-36 155.6 116 65.5
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 3.4e-36 155.2 128 57.8
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 3.4e-36 155.2 108 65.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 4.5e-36 154.8 120 60.0
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 5.9e-36 154.5 129 58.1
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 5.9e-36 154.5 129 58.1
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 7.6e-36 154.1 111 66.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.0e-35 153.7 125 60.8
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.3e-35 153.3 129 57.4
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.7e-35 152.9 114 64.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.2e-35 152.5 129 57.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.9e-35 152.1 95 75.8
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 3.8e-35 151.8 122 59.0
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 8.5e-35 150.6 111 61.3
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 8.5e-35 150.6 115 61.7
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.1e-34 150.2 125 60.0
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.1e-34 150.2 94 74.5
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.4e-34 149.8 107 63.6
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.4e-34 149.8 105 69.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.9e-34 149.4 111 63.1
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.5e-34 149.1 116 61.2
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.5e-34 149.1 116 61.2
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 7.2e-34 147.5 120 61.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.6e-33 146.4 130 56.2
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.6e-33 146.4 109 62.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 7.9e-33 144.1 108 62.0
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.8e-32 142.9 105 64.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.5e-31 139.8 101 67.3
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 4.3e-31 138.3 96 68.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 5.7e-31 137.9 93 69.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.2e-28 130.2 72 87.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.6e-28 129.0 108 53.7
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.4e-28 128.6 97 60.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.1e-26 123.6 118 51.7
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.2e-26 121.7 101 60.4
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.2e-25 120.2 83 71.1
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.4e-24 116.7 81 66.7
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 2.3e-24 115.9 81 65.4
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 5.1e-24 114.8 106 50.0
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 5.7e-23 111.3 77 64.9
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 5.7e-23 111.3 85 55.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.8e-22 109.0 121 50.4
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.4e-21 106.7 91 58.2
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 9.1e-21 104.0 75 62.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.5e-20 103.2 67 71.6
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-17 93.6 90 53.3
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 8.0e-17 90.9 61 65.6
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.7e-09 65.1 40 67.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 1.8e-08 63.2 96 39.6
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.2e-07 60.5 44 59.1


User provided reference genes

Program Settings