Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 7.6e-53 210.3 112 100.0
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-34 149.4 108 75.0
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 2.6e-16 89.0 97 46.4
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 9.7e-16 87.0 97 44.3
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 2.8e-15 85.5 101 41.6
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-14 83.2 101 41.6
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 4.1e-14 81.6 97 43.3
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 2.7e-13 79.0 90 44.4
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 1.0e-12 77.0 101 36.6
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-12 76.6 101 37.6
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.9e-12 75.5 50 76.0
Lj5P293T5 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-11 73.6 86 45.3
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-11 73.2 101 37.6
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.6e-10 68.6 93 39.8
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-10 67.4 101 32.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-09 65.9 101 36.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.0e-09 65.1 101 35.6
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.0e-09 65.1 100 38.0
Lju225C5T9 Lonicera japonica HOM05D008183 ORTHO05D007254 4.0e-09 65.1 83 43.4
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 5.2e-09 64.7 43 76.7
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-09 64.7 101 37.6
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-08 63.2 92 38.0
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-08 63.2 96 41.7
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.5e-08 63.2 94 38.3
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.6e-08 62.4 98 37.8
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 2.6e-08 62.4 98 34.7
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.4e-08 62.0 103 35.9
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.4e-08 62.0 101 34.7
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.7e-08 61.2 100 38.0
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.8e-08 60.5 98 35.7
Lj3P938T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-07 60.1 73 41.1
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-07 60.1 103 35.0
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-07 60.1 103 35.0
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 2.2e-07 59.3 96 36.5
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.8e-07 58.9 103 36.9
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-07 58.2 112 36.6
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.8e-07 58.2 99 34.3
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 6.3e-07 57.8 79 38.0
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.3e-07 57.8 101 34.7
Lj3C625T2 Lonicera japonica HOM05D008183 ORTHO05D007254 8.3e-07 57.4 86 37.2
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.0 97 38.1
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-06 56.6 80 36.2
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 1.8e-06 56.2 105 32.4
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 4.1e-06 55.1 76 42.1
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.0e-06 54.3 102 32.4
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 9.1e-06 53.9 60 41.7
Lj8P115T49 Lonicera japonica HOM05D008183 ORTHO05D007254 9.1e-06 53.9 84 36.9


User provided reference genes

Program Settings