Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 5.9e-64 247.3 118 100.0
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 3.8e-18 95.1 103 41.7
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 8.4e-18 94.0 113 36.3
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 8.4e-18 94.0 114 39.5
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 7.1e-17 90.9 108 38.9
Lj1C222T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.1e-16 89.4 100 43.0
Lj7C520T4 Lonicera japonica HOM05D000003 ORTHO05D000004 4.6e-16 88.2 117 33.3
Lj6P43T37 Lonicera japonica HOM05D000003 ORTHO05D000004 1.0e-15 87.0 110 36.4
Lj7C747G6 Lonicera japonica HOM05D000003 ORTHO05D000004 5.1e-15 84.7 98 37.8
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 8.7e-15 84.0 96 39.6
Lj2P545T25 Lonicera japonica HOM05D057521 ORTHO05D025757 1.5e-14 83.2 77 48.1
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 1.5e-14 83.2 99 39.4
Lj6C95T3 Lonicera japonica HOM05D018958 ORTHO05D000167 4.3e-14 81.6 77 48.1
CANSAT21G2614 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-14 81.3 112 37.5
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-14 80.5 115 36.5
CANSAT64G2500 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-13 79.3 112 37.5
Lj1C134T2 Lonicera japonica HOM05D000003 ORTHO05D000167 2.1e-13 79.3 77 40.3
CANSAT21G2540 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-13 79.0 112 36.6
CANSAT56G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-13 77.8 102 39.2
CANSAT80G1560 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-12 76.6 102 39.2
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-12 76.3 110 37.3
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 1.8e-12 76.3 109 33.9
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-12 75.5 115 34.8
Lj5P296T4 Lonicera japonica HOM05D000003 ORTHO05D000004 6.9e-12 74.3 107 33.6
CANSAT80G1540 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-12 73.9 112 36.6
Lj2P99T51 Lonicera japonica HOM05D014440 ORTHO05D000167 9.0e-12 73.9 95 36.8
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 9.0e-12 73.9 112 34.8
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 1.2e-11 73.6 114 32.5
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 1.5e-11 73.2 114 34.2
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-11 72.4 117 32.5
CANSAT54G1182 Cannabis sativa HOM05D000003 ORTHO05D000167 4.5e-11 71.6 96 36.5
Lj5C295T1 Lonicera japonica HOM05D014440 ORTHO05D000167 4.5e-11 71.6 97 35.1
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 5.8e-11 71.2 116 30.2
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-11 70.9 109 37.6
CANSAT78G1083 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-11 70.9 110 32.7
Lj3P924T30 Lonicera japonica HOM05D021412 ORTHO05D000167 9.9e-11 70.5 97 36.1
CANSAT21G2268 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-10 69.7 101 37.6
CANSAT54G1106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-10 69.7 116 32.8
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-10 69.3 100 37.0
CANSAT56G2867 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-10 69.3 100 36.0
Lj4C747T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.2e-10 69.3 78 39.7
CANSAT35G0207 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-10 68.9 103 35.9
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-10 68.6 112 34.8
CANSAT78G2359 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-10 68.6 114 33.3
CANSAT80G2836 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-10 68.2 113 32.7
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.4e-10 67.8 103 32.0
Manes.10G073050 Manihot esculenta HOM05D000003 ORTHO05D000167 1.1e-09 67.0 113 31.9
CANSAT54G3006 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-09 66.2 99 32.3
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-09 65.9 110 31.8
Lj1C16T17 Lonicera japonica HOM05D011238 ORTHO05D004093 2.4e-09 65.9 67 46.3
CANSAT35G0748 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-09 65.5 115 31.3
CANSAT25G2489 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-09 65.1 103 35.0
Lj2P447T23 Lonicera japonica HOM05D014440 ORTHO05D000167 5.5e-09 64.7 110 28.2
CANSAT56G4532 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-09 64.3 114 30.7
CANSAT64G1066 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-09 63.9 101 37.6
Lj8P222T10 Lonicera japonica HOM05D014440 ORTHO05D000167 9.3e-09 63.9 99 30.3
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 9.3e-09 63.9 113 30.1
Nitab4.5_0006377g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000167 9.3e-09 63.9 110 30.9
Lju926C12G8 Lonicera japonica HOM05D000003 ORTHO05D000004 1.2e-08 63.5 90 37.8
Manes.10G125312 Manihot esculenta HOM05D000003 ORTHO05D000167 1.2e-08 63.5 112 30.4
Lj6A88T9 Lonicera japonica HOM05D018958 ORTHO05D000167 1.6e-08 63.2 67 44.8
CANSAT56G0969 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-08 62.8 101 34.7
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-08 62.8 118 33.1
Lj7P99T38 Lonicera japonica HOM05D014440 ORTHO05D000167 2.1e-08 62.8 114 28.9
CANSAT11G1919 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-08 62.4 93 37.6
CANSAT64G0262 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-08 62.4 110 30.0
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 2.7e-08 62.4 82 34.1
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 3.5e-08 62.0 60 43.3
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 3.5e-08 62.0 118 33.1
SHI45994 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-08 62.0 114 27.2
CANSAT11G0809 Cannabis sativa HOM05D000003 ORTHO05D000167 4.6e-08 61.6 115 29.6
CANSAT64G1882 Cannabis sativa HOM05D000003 ORTHO05D000167 4.6e-08 61.6 110 31.8
CANSAT78G0561 Cannabis sativa HOM05D000003 ORTHO05D000167 7.9e-08 60.8 100 32.0
Lj1P1179T15 Lonicera japonica HOM05D000003 ORTHO05D000004 7.9e-08 60.8 67 40.3
Lj8C225G9 Lonicera japonica HOM05D000003 ORTHO05D000004 7.9e-08 60.8 84 32.1
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 60.5 97 36.1
CANSAT64G2253 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 60.5 91 35.2
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.3e-07 60.1 114 29.8
CANSAT01G0940 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-07 59.7 114 29.8
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-07 59.3 117 29.1
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 2.3e-07 59.3 89 37.1
TAR351G0004 Trochodendron aralioides HOM05D000003 ORTHO05D009135 2.3e-07 59.3 97 34.0
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-07 58.5 83 37.3
CANSAT56G3497 Cannabis sativa HOM05D000003 ORTHO05D000167 3.9e-07 58.5 116 30.2
CANSAT11G2042 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-07 58.2 102 30.4
CANSAT54G2007 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-07 58.2 114 28.9
Lj1C50T12 Lonicera japonica HOM05D000003 ORTHO05D000004 5.1e-07 58.2 59 35.6
Nitab4.5_0002329g0130 Nicotiana tabacum HOM05D040793 ORTHO05D020832 5.1e-07 58.2 112 32.1
CANSAT80G1930 Cannabis sativa HOM05D000003 ORTHO05D000167 6.7e-07 57.8 89 36.0
SHI02062 Sapria himalayana HOM05D000003 ORTHO05D000004 6.7e-07 57.8 114 26.3
CANSAT21G0505 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.0 123 34.1
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.0 89 32.6
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 122 28.7
Manes.15G179404 Manihot esculenta HOM05D000003 ORTHO05D000167 1.5e-06 56.6 99 30.3
CANSAT21G1925 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-06 56.2 90 33.3
CANSAT35G0201 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-06 56.2 108 29.6
Lj7C739T7 Lonicera japonica HOM05D000040 ORTHO05D001305 1.9e-06 56.2 57 42.1
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.5 103 30.1
Lj1P164T10 Lonicera japonica HOM05D000003 ORTHO05D000004 4.3e-06 55.1 63 36.5
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 4.3e-06 55.1 84 33.3
BolC2t11594H Brassica oleracea HOM05D000003 ORTHO05D001498 5.6e-06 54.7 117 34.2
LjContig00310g0023480 Lotus japonicus HOM05D000003 ORTHO05D000004 5.6e-06 54.7 105 33.3
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 7.4e-06 54.3 96 27.1
CANSAT11G2301 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 54.3 86 32.6
Lj6P383T11 Lonicera japonica HOM05D000003 ORTHO05D000004 7.4e-06 54.3 54 44.4
QL05p026767 Quercus lobata HOM05D000003 ORTHO05D000167 9.6e-06 53.9 77 35.1


User provided reference genes

Program Settings