Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.8e-87 325.9 162 100.0
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 5.1e-50 201.4 164 54.9
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 6.7e-50 201.1 159 56.0
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.7e-50 201.1 158 56.3
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.9e-49 199.5 163 54.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 2.8e-48 195.7 145 54.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 8.2e-48 194.1 121 66.9
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.8e-47 193.0 151 57.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.8e-47 193.0 151 56.3
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.4e-47 192.6 155 51.6
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 4.1e-47 191.8 116 67.2
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 5.9e-46 188.0 107 69.2
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.7e-45 186.4 107 68.2
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.2e-45 186.0 153 55.6
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.9e-45 185.7 150 56.0
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 5.0e-45 184.9 110 68.2
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 6.5e-45 184.5 151 55.0
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 8.5e-45 184.1 150 54.7
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.4e-44 183.3 144 53.5
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.4e-44 183.3 150 54.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.9e-44 183.0 106 69.8
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 4.2e-44 181.8 112 63.4
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 9.4e-44 180.6 135 55.6
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.6e-43 179.9 104 68.3
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.7e-43 179.1 108 67.6
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 3.6e-43 178.7 156 51.9
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 3.6e-43 178.7 116 62.9
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.6e-43 178.7 142 55.6
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 4.6e-43 178.3 110 62.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 6.1e-43 177.9 119 63.0
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.0e-42 177.2 107 66.4
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.4e-42 176.8 116 64.7
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.4e-42 176.8 117 63.2
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.8e-42 176.4 107 65.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 1.8e-42 176.4 108 69.4
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.8e-42 176.4 152 50.0
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.3e-42 176.0 113 65.5
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 3.0e-42 175.6 116 63.8
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 5.1e-42 174.9 151 51.7
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 6.7e-42 174.5 116 60.3
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 8.8e-42 174.1 116 61.2
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 8.8e-42 174.1 111 64.0
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.1e-41 173.7 149 50.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.0e-41 172.9 110 63.6
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 2.0e-41 172.9 110 63.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.0e-41 172.9 96 71.9
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.5e-41 172.6 110 63.6
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.5e-41 172.6 105 65.7
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.3e-41 172.2 104 67.3
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.3e-41 172.2 104 67.3
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.3e-41 172.2 104 67.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 3.3e-41 172.2 113 59.3
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 4.3e-41 171.8 101 64.4
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 4.3e-41 171.8 153 51.0
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 9.7e-41 170.6 147 49.0
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.3e-40 170.2 104 62.5
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.3e-40 170.2 153 51.6
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.7e-40 169.9 104 65.4
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 2.2e-40 169.5 104 65.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.8e-40 169.1 108 63.9
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 4.8e-40 168.3 96 71.9
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 8.2e-40 167.5 104 61.5
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 8.2e-40 167.5 147 47.6
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.1e-39 167.2 116 58.6
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.1e-39 167.2 152 50.0
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.4e-39 166.8 150 51.3
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.4e-39 166.0 152 51.3
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 5.3e-39 164.9 153 47.7
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 5.3e-39 164.9 104 61.5
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 9.1e-39 164.1 142 52.1
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.2e-38 163.7 113 60.2
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.5e-38 163.3 94 66.0
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.0e-38 162.9 147 53.1
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.0e-38 162.9 152 47.4
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 3.4e-38 162.2 107 60.7
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 5.9e-38 161.4 107 60.7
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 5.9e-38 161.4 109 60.6
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.7e-37 159.8 107 60.7
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 8.5e-37 157.5 153 47.7
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 8.5e-37 157.5 121 53.7
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.4e-36 156.8 96 64.6
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.9e-36 156.4 109 56.9
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 5.5e-36 154.8 173 44.5
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.6e-35 153.3 108 59.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.6e-35 152.1 153 46.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.7e-35 151.8 137 49.6
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 4.4e-33 145.2 99 57.6
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.2e-32 142.9 89 82.0
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.8e-31 139.8 98 54.1
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 5.3e-31 138.3 101 55.4
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 9.1e-31 137.5 156 44.2
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.2e-30 137.1 164 44.5
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.5e-28 130.2 156 42.9
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 5.5e-28 128.3 130 49.2
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.7e-27 125.9 66 75.8
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.2e-24 114.4 69 69.6
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.4e-23 113.6 77 55.8
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 6.1e-11 71.6 41 73.2
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.0e-10 69.3 86 39.5
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 6.8e-10 68.2 91 36.3
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.1e-07 60.8 40 52.5


User provided reference genes

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