Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P184T43 Lonicera japonica HOM05D008679 ORTHO05D010804 4.4e-234 814.3 423 100.0
Dinv38933 Davidia involucrata HOM05D008679 ORTHO05D010804 4.7e-103 379.0 414 55.1
Lj2C0T7 Lonicera japonica HOM05D008679 ORTHO05D010804 1.0e-94 351.3 203 92.6
Actinidia01999 Actinidia chinensis HOM05D008679 ORTHO05D010804 5.0e-89 332.4 432 48.1
Actinidia14568 Actinidia chinensis HOM05D008679 ORTHO05D010804 1.0e-86 324.7 417 48.4
Hma1.2p1_0896F.1_g234080 Hydrangea macrophylla HOM05D008679 ORTHO05D010804 2.3e-86 323.6 436 46.8
Dinv37632 Davidia involucrata HOM05D008679 ORTHO05D010804 5.4e-83 312.4 440 46.8
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 1.7e-76 290.8 445 42.9
Rhsim02G0231800 Rhododendron simsii HOM05D008679 ORTHO05D010804 2.8e-71 273.5 446 41.7
TAR374G0287 Trochodendron aralioides HOM05D008679 ORTHO05D010804 2.1e-50 204.1 432 36.1
TAR375G0988 Trochodendron aralioides HOM05D008679 ORTHO05D010804 1.5e-48 198.0 437 35.2
Oeu007747.1 Olea europaea HOM05D008679 ORTHO05D010804 4.8e-47 193.0 425 34.6
Potri.001G103200 Populus trichocarpa HOM05D008679 ORTHO05D010804 1.6e-42 177.9 589 27.5
Prupe.5G101200 Prunus persica HOM05D008679 ORTHO05D010804 1.9e-40 171.0 569 30.1
DCAR_000618 Daucus carota HOM05D008679 ORTHO05D010804 7.4e-40 169.1 460 33.0
QL12p032781 Quercus lobata HOM05D008679 ORTHO05D010804 4.0e-38 163.3 586 27.0
Sabra01G0077900 Salix brachista HOM05D008679 ORTHO05D010804 5.3e-38 162.9 586 26.5
Ciclev10019505m.g Citrus clementina HOM05D008679 ORTHO05D010804 1.3e-36 158.3 539 27.5
Cfa012221 Carpinus fangiana HOM05D008679 ORTHO05D010804 8.4e-36 155.6 567 28.6
Manes.02G019900 Manihot esculenta HOM05D008679 ORTHO05D010804 3.9e-33 146.7 570 27.4
Thecc.03G280000 Theobroma cacao HOM05D008679 ORTHO05D010804 3.9e-33 146.7 555 28.3
TWI15G0527 Tripterygium wilfordii HOM05D008679 ORTHO05D010804 3.3e-32 143.7 539 29.7
RcHm_v2.0_Chr7g0197481 Rosa chinensis HOM05D008679 ORTHO05D010804 2.6e-29 134.0 581 26.7
Potri.003G128400 Populus trichocarpa HOM05D008679 ORTHO05D010804 1.0e-28 132.1 570 26.3
CiPaw.11G134300 Carya illinoinensis HOM05D008679 ORTHO05D010804 2.2e-28 131.0 433 29.3
Duzib205G1921 Durio zibethinus HOM05D008679 ORTHO05D010804 1.6e-26 124.8 579 26.3
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.9e-24 117.9 390 29.2
Duzib084G0348 Durio zibethinus HOM05D008679 ORTHO05D010804 8.2e-23 112.5 568 27.8
Nn1g01544 Nelumbo nucifera HOM05D008679 ORTHO05D010804 3.2e-19 100.5 226 34.5
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.0e-17 95.5 584 24.7
Cpa.g.sc74.7 Carica papaya HOM05D008679 ORTHO05D010804 2.3e-17 94.4 524 26.3
FAN08G1707 Fragaria x ananassa HOM05D008679 ORTHO05D010804 2.3e-17 94.4 584 24.3
FAN04G2302 Fragaria x ananassa HOM05D008679 ORTHO05D010804 2.0e-16 91.3 588 23.6
Migut.A00736 Erythranthe guttata HOM05D033559 ORTHO05D010804 2.5e-16 90.9 448 28.1
MD06G1085200 Malus domestica HOM05D008679 ORTHO05D010804 1.3e-15 88.6 457 26.5
MSTRG.11979 Avicennia marina HOM05D008679 ORTHO05D010804 2.8e-15 87.4 287 29.3
Gohir.D12G231200 Gossypium hirsutum HOM05D008679 ORTHO05D010804 6.3e-15 86.3 557 25.3
Gorai.008G247400 Gossypium raimondii HOM05D008679 ORTHO05D010804 1.1e-14 85.5 557 25.5
FvH4_5g02611 Fragaria vesca HOM05D008679 ORTHO05D010804 6.9e-14 82.8 584 23.1
COL.COLO4_34476 Corchorus olitorius HOM05D008679 ORTHO05D010804 1.2e-13 82.0 544 25.9
FAN18G1823 Fragaria x ananassa HOM05D008679 ORTHO05D010804 4.5e-13 80.1 584 22.9
PGR031G2708 Punica granatum HOM05D008679 ORTHO05D010804 3.8e-12 77.0 426 27.2
SGA_v2.0_scaffold360G49893 Striga asiatica HOM05D033559 ORTHO05D000309 5.5e-11 73.2 387 25.3
Gohir.A12G230100 Gossypium hirsutum HOM05D008679 ORTHO05D010804 2.1e-10 71.2 235 32.8
SGA_v2.0_scaffold173G39173 Striga asiatica HOM05D033559 ORTHO05D010804 1.0e-09 68.9 426 25.8
MBI17_g24686_MAGBIO Magnolia biondii HOM05D008679 ORTHO05D010804 3.9e-09 67.0 421 24.9
ECA240G3768 Erigeron canadensis HOM05D008679 ORTHO05D010804 5.1e-09 66.6 410 27.1
THA.LOC104809395 Tarenaya hassleriana HOM05D012463 ORTHO05D014408 3.3e-08 63.9 182 33.5
Sabra03G0091300 Salix brachista HOM05D008679 ORTHO05D010804 6.3e-07 59.7 151 30.5


User provided reference genes

Program Settings