Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.0e-122 443.7 277 100.0
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 1.2e-62 244.2 316 50.0
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 2.7e-59 233.0 361 49.3
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 3.6e-59 232.6 283 60.1
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 6.1e-59 231.9 315 54.3
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 1.8e-58 230.3 342 52.9
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 3.0e-58 229.6 341 55.7
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 5.1e-58 228.8 329 47.7
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.1e-57 227.6 335 56.4
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 1.5e-57 227.3 315 54.9
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 5.7e-57 225.3 336 53.3
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 3.7e-56 222.6 330 53.9
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 4.8e-56 222.2 343 51.0
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 1.8e-55 220.3 343 52.2
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.8e-55 220.3 288 55.6
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 4.1e-55 219.2 333 53.2
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 4.1e-55 219.2 295 60.7
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 9.0e-55 218.0 314 55.1
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.5e-54 217.2 340 51.2
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.0e-54 216.9 290 56.9
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 2.0e-54 216.9 315 55.2
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 5.9e-54 215.3 302 55.0
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 5.9e-54 215.3 291 56.7
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 1.7e-53 213.8 291 56.7
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.7e-53 213.8 291 56.7
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.2e-53 213.4 285 48.1
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 3.8e-53 212.6 306 46.1
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 3.8e-53 212.6 331 49.2
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 5.0e-53 212.2 355 49.6
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 5.0e-53 212.2 326 51.8
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 2.5e-52 209.9 258 60.1
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 2.5e-52 209.9 329 43.5
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 4.2e-52 209.1 325 53.2
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 4.6e-51 205.7 325 41.5
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 7.9e-51 204.9 278 56.8
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 1.8e-50 203.8 332 52.4
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 2.3e-50 203.4 289 55.4
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.6e-49 199.9 293 47.1
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.8e-48 196.4 293 46.1
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 4.8e-48 195.7 268 47.8
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.8e-47 193.7 289 46.0
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 4.1e-47 192.6 276 55.8
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 2.0e-46 190.3 324 49.7
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 4.2e-44 182.6 255 53.7
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.2e-43 181.0 338 47.0
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 4.7e-43 179.1 277 50.9
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 7.9e-43 178.3 217 63.6
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 8.8e-42 174.9 217 53.0
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 1.5e-41 174.1 280 52.5
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 2.0e-41 173.7 214 63.6
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 2.2e-40 170.2 265 51.3
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 2.8e-40 169.9 263 52.9
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 6.3e-40 168.7 265 50.9
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.8e-39 167.2 261 44.1
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.8e-39 167.2 344 40.4
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.2e-38 164.5 281 53.7
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.6e-38 164.1 260 50.8
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.0e-38 163.7 237 60.3
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 3.5e-38 162.9 247 52.6
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 4.5e-38 162.5 237 58.6
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 1.3e-37 161.0 257 52.9
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 3.8e-37 159.5 332 48.8
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.1e-36 157.9 260 53.1
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 7.2e-36 155.2 252 48.0
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 2.7e-35 153.3 369 42.8
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 4.7e-35 152.5 316 45.3
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.8e-34 150.6 287 46.0
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 1.8e-34 150.6 295 47.8
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 6.7e-34 148.7 277 45.1
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 2.0e-33 147.1 207 43.5
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 2.6e-33 146.7 311 45.0
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 2.6e-33 146.7 257 49.4
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.7e-33 145.6 231 41.1
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 9.7e-33 144.8 266 47.4
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 8.2e-32 141.7 261 37.9
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 2.4e-31 140.2 249 51.0
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 4.5e-30 136.0 260 44.2
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 4.5e-30 136.0 260 44.2
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 1.3e-29 134.4 299 43.5
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 5.0e-29 132.5 252 44.0
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 5.0e-29 132.5 252 44.0
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 2.1e-27 127.1 252 43.3
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 4.8e-24 115.9 254 40.9
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 1.1e-23 114.8 256 45.7
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 5.4e-23 112.5 265 42.6
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 7.0e-23 112.1 256 44.9
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 5.9e-22 109.0 280 31.4
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.9e-21 106.7 133 52.6
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 4.4e-17 92.8 251 33.5
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 7.5e-17 92.0 279 37.3
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 2.8e-16 90.1 245 33.1
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 5.4e-15 85.9 135 47.4
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 1.6e-14 84.3 108 49.1
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 4.5e-14 82.8 251 29.9
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.1e-12 78.2 149 40.9
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.9e-12 77.4 102 46.1
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.2e-11 74.7 256 27.0
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 3.6e-11 73.2 185 34.6
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 3.7e-08 63.2 148 35.1
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 2.4e-07 60.5 161 32.3


User provided reference genes

Program Settings