Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 7.3e-86 320.5 157 100.0
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 6.0e-80 300.8 157 94.3
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 2.4e-68 262.3 151 85.4
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 5.3e-68 261.2 153 81.7
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 1.2e-67 260.0 158 77.2
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.2e-67 260.0 149 83.2
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 1.7e-66 256.1 158 78.5
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 4.9e-66 254.6 157 75.8
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.9e-65 252.7 158 75.3
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 4.2e-65 251.5 158 75.3
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 7.1e-65 250.8 157 74.5
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 1.6e-64 249.6 153 75.8
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 3.5e-64 248.4 146 78.1
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.5e-64 248.4 158 75.9
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.5e-64 248.4 158 75.9
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 6.0e-64 247.7 152 76.3
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 1.0e-63 246.9 144 80.6
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 1.3e-63 246.5 157 74.5
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.8e-63 246.1 150 78.7
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.3e-63 245.7 158 75.9
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 3.0e-63 245.4 154 74.0
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 3.0e-63 245.4 156 73.7
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 3.0e-63 245.4 158 73.4
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 3.9e-63 245.0 157 72.0
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 6.7e-63 244.2 156 74.4
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 8.7e-63 243.8 153 72.5
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.1e-62 243.4 146 76.0
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.1e-62 243.4 153 73.2
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.5e-62 243.0 154 75.3
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.5e-62 243.0 158 75.3
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 1.5e-62 243.0 155 72.9
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 1.9e-62 242.7 150 73.3
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 2.5e-62 242.3 157 73.9
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.5e-62 242.3 150 77.3
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 2.5e-62 242.3 156 71.2
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 4.3e-62 241.5 158 72.8
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 5.7e-62 241.1 149 74.5
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 5.7e-62 241.1 146 77.4
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 5.7e-62 241.1 153 73.9
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 1.3e-61 240.0 149 73.2
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.3e-61 240.0 158 73.4
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.3e-61 240.0 158 74.1
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 1.6e-61 239.6 158 70.9
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 1.6e-61 239.6 158 70.9
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.1e-61 239.2 148 73.6
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 2.1e-61 239.2 156 73.1
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 2.8e-61 238.8 157 70.1
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 3.7e-61 238.4 155 69.0
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 3.7e-61 238.4 157 73.2
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 6.3e-61 237.7 155 71.6
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 6.3e-61 237.7 157 68.2
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 1.4e-60 236.5 156 71.8
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 1.8e-60 236.1 157 72.6
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.8e-60 236.1 151 74.8
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.8e-60 236.1 150 74.0
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.4e-60 235.7 155 67.7
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 2.4e-60 235.7 157 72.0
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 3.1e-60 235.3 158 67.1
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 3.1e-60 235.3 150 73.3
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 3.1e-60 235.3 157 68.8
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.2e-59 233.4 157 68.2
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 1.5e-59 233.0 145 77.2
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 3.4e-59 231.9 154 69.5
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 5.9e-59 231.1 154 72.1
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 5.9e-59 231.1 153 69.9
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 7.6e-59 230.7 152 70.4
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 7.6e-59 230.7 153 69.9
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 7.6e-59 230.7 148 70.9
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 1.0e-58 230.3 152 69.7
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.0e-58 230.3 149 72.5
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 1.3e-58 229.9 148 75.0
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 1.7e-58 229.6 152 70.4
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 1.7e-58 229.6 155 73.5
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 2.9e-58 228.8 149 70.5
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 5.0e-58 228.0 156 69.9
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 5.0e-58 228.0 152 69.1
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 5.0e-58 228.0 156 67.3
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 8.5e-58 227.3 145 71.0
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.4e-57 226.5 152 68.4
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 4.2e-57 224.9 151 70.9
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 9.3e-57 223.8 144 71.5
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 9.3e-57 223.8 152 69.7
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 9.3e-57 223.8 138 76.1
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 9.3e-57 223.8 148 69.6
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 4.6e-56 221.5 157 68.8
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.0e-55 220.3 155 67.1
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.0e-55 220.3 156 69.9
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.8e-55 219.5 146 69.9
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 2.3e-55 219.2 144 70.8
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 1.9e-54 216.1 157 66.2
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 3.3e-54 215.3 144 69.4
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 3.3e-54 215.3 157 66.9
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 1.3e-53 213.4 157 64.3
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.6e-53 213.0 157 64.3
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 4.8e-53 211.5 144 68.1
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.1e-52 210.3 157 62.4
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.4e-52 209.9 157 62.4
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 5.3e-52 208.0 153 62.7
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 5.3e-52 208.0 153 64.1
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 6.9e-52 207.6 160 63.8
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 9.1e-52 207.2 153 63.4
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 9.1e-52 207.2 153 62.7
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 1.5e-51 206.5 148 62.8
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 2.6e-51 205.7 155 60.6
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 1.0e-50 203.8 153 62.7
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 1.0e-50 203.8 153 62.7
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.3e-50 203.4 142 65.5
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.1e-49 200.3 144 61.8
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.4e-49 199.9 154 58.4
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 4.2e-49 198.4 142 62.7
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.6e-48 195.3 144 60.4
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 3.6e-48 195.3 122 75.4
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 6.7e-47 191.0 157 61.1
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.8e-44 183.0 126 67.5
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.6e-40 169.9 144 53.5
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.0e-39 167.2 126 61.1
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.4e-39 166.8 131 59.5
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 3.0e-39 165.6 99 75.8
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 8.8e-39 164.1 145 49.0
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 3.7e-37 158.7 144 51.4
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 8.2e-37 157.5 115 67.0
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 2.4e-36 156.0 145 51.7
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 3.1e-36 155.6 142 52.8
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 5.3e-36 154.8 140 63.6
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.3e-34 150.2 155 51.6
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 6.1e-32 141.4 96 66.7
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 4.4e-30 135.2 103 58.3
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 1.6e-27 126.7 141 48.9
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 2.7e-27 125.9 142 45.8
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 3.2e-25 119.0 148 46.6
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 2.1e-24 116.3 83 63.9
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 2.6e-22 109.4 142 40.8
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 2.2e-21 106.3 85 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 3.1e-20 102.4 84 53.6


User provided reference genes

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