Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 1.1e-69 266.5 134 100.0
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.4e-32 143.3 136 58.8
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 8.9e-32 140.6 132 58.3
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.5e-31 139.8 137 58.4
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 1.5e-31 139.8 136 57.4
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 3.4e-31 138.7 131 58.8
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 4.4e-31 138.3 133 58.6
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 7.5e-31 137.5 132 58.3
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 7.5e-31 137.5 132 58.3
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 1.3e-30 136.7 136 57.4
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 2.2e-30 136.0 134 56.7
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 3.7e-30 135.2 130 56.9
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 8.3e-30 134.0 138 57.2
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 8.3e-30 134.0 132 56.1
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.1e-29 133.7 131 57.3
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 1.4e-29 133.3 132 56.8
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 1.9e-29 132.9 136 55.1
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 2.4e-29 132.5 138 58.0
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 5.4e-29 131.3 132 54.5
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 9.2e-29 130.6 132 55.3
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.2e-28 130.2 136 54.4
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 1.6e-28 129.8 137 56.2
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 2.7e-28 129.0 132 56.1
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 3.5e-28 128.6 132 55.3
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 3.5e-28 128.6 108 61.1
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 6.0e-28 127.9 108 58.3
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 6.0e-28 127.9 128 53.9
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.3e-27 126.7 137 56.2
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 1.7e-27 126.3 136 53.7
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.7e-27 126.3 131 54.2
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.3e-27 125.9 138 55.8
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 2.3e-27 125.9 133 54.9
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.3e-27 125.9 131 54.2
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 2.3e-27 125.9 136 52.2
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 3.0e-27 125.6 136 52.2
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 3.9e-27 125.2 132 52.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 5.0e-27 124.8 136 51.5
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 5.0e-27 124.8 140 52.1
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 5.0e-27 124.8 135 54.1
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 1.1e-26 123.6 135 53.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.5e-26 123.2 137 50.4
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.9e-26 122.9 108 60.2
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 2.5e-26 122.5 125 55.2
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 3.3e-26 122.1 137 54.7
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.3e-26 122.1 131 52.7
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 4.3e-26 121.7 130 53.1
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 5.6e-26 121.3 137 49.6
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 7.3e-26 120.9 131 52.7
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 7.3e-26 120.9 131 52.7
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.2e-25 120.2 137 49.6
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.6e-25 119.8 136 50.0
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 2.1e-25 119.4 139 51.8
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.1e-25 119.4 137 48.9
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.1e-25 119.4 134 49.3
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 2.8e-25 119.0 122 52.5
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 6.2e-25 117.9 141 49.6
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 1.1e-24 117.1 140 51.4
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 1.8e-24 116.3 136 49.3
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 3.1e-24 115.5 133 50.4
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 3.1e-24 115.5 139 49.6
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 4.0e-24 115.2 105 55.2
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 5.2e-24 114.8 137 52.6
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 6.8e-24 114.4 135 50.4
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 8.9e-24 114.0 126 49.2
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 8.9e-24 114.0 132 49.2
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 5.8e-23 111.3 129 51.2
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 5.8e-23 111.3 131 49.6
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 9.8e-23 110.5 129 52.7
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.2e-22 109.4 137 51.1
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 2.2e-22 109.4 136 51.5
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 4.9e-22 108.2 127 48.0
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 6.4e-22 107.8 131 50.4
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 8.3e-22 107.5 136 50.7
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 8.3e-22 107.5 136 50.7
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 7.1e-21 104.4 133 48.1
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 7.1e-21 104.4 127 48.0
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 1.6e-20 103.2 139 45.3
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.1e-20 102.8 134 48.5
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 2.7e-20 102.4 121 49.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 2.7e-20 102.4 82 62.2
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 4.6e-20 101.7 136 47.8
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 6.0e-20 101.3 134 49.3
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 7.8e-20 100.9 133 45.1
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 7.8e-20 100.9 131 45.0
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 7.8e-20 100.9 128 46.9
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.0e-19 100.5 106 50.9
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.3e-19 100.1 104 54.8
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.7e-19 99.8 110 52.7
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.0e-19 99.0 106 50.0
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 3.9e-19 98.6 135 48.1
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 8.6e-19 97.4 134 46.3
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 8.6e-19 97.4 136 47.1
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 8.6e-19 97.4 134 46.3
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 1.1e-18 97.1 133 46.6
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.1e-18 97.1 134 45.5
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 1.5e-18 96.7 134 46.3
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 3.3e-18 95.5 119 48.7
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 5.6e-18 94.7 134 45.5
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 1.2e-17 93.6 124 47.6
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 1.6e-17 93.2 125 46.4
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 2.1e-17 92.8 111 45.0
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 8.9e-16 87.4 126 44.4
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.0e-15 86.3 116 47.4
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 3.4e-15 85.5 125 48.0
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 4.4e-15 85.1 135 41.5
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.7e-14 83.2 121 45.5
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 1.4e-13 80.1 121 45.5
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 2.4e-13 79.3 87 50.6
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 2.4e-13 79.3 102 40.2
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 3.5e-12 75.5 137 41.6
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 3.5e-12 75.5 137 41.6
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.6e-12 75.1 67 59.7
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.6e-12 75.1 67 59.7
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 6.0e-12 74.7 67 61.2
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 2.8e-09 65.9 109 38.5
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 2.8e-09 65.9 87 46.0
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 1.2e-07 60.5 85 48.2
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 9.9e-07 57.4 103 43.7
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.3e-06 57.0 121 38.0
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 1.7e-06 56.6 85 47.1
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 4.9e-06 55.1 85 45.9
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 4.9e-06 55.1 85 45.9


User provided reference genes

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