Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.8e-79 299.3 157 100.0
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.0e-58 230.3 157 79.0
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.3e-58 229.9 157 79.6
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.3e-58 229.9 157 79.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 76.9
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.1e-57 226.9 157 79.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.4e-57 226.5 157 77.1
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.5e-57 225.7 157 75.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.5e-57 225.7 157 75.2
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 7.2e-57 224.2 157 77.1
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 77.1
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 4.6e-56 221.5 157 75.8
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 4.6e-56 221.5 157 77.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 7.9e-56 220.7 153 77.8
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.3e-55 219.9 157 73.9
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.1e-54 216.9 153 75.2
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 4.3e-54 214.9 157 70.7
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 7.4e-54 214.2 157 73.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.6e-53 213.0 151 76.2
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.2e-53 212.6 157 72.6
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.8e-53 212.2 157 73.2
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 3.7e-53 211.8 157 73.2
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 4.8e-53 211.5 157 70.7
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 4.8e-53 211.5 157 73.2
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.1e-52 210.3 157 72.0
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 1.1e-52 210.3 157 73.2
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 1.8e-52 209.5 128 83.6
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.4e-52 209.1 144 77.8
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.4e-52 209.1 162 69.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 72.2
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 72.2
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 6.9e-52 207.6 157 70.7
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 9.1e-52 207.2 122 86.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.2e-51 206.8 157 70.1
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 157 72.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.5e-51 206.5 123 87.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 71.3
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 71.5
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 4.5e-51 204.9 157 73.2
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.5e-51 204.9 158 72.2
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 5.9e-51 204.5 158 69.0
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.9e-51 204.5 127 82.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 5.9e-51 204.5 158 70.3
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 7.7e-51 204.1 157 74.5
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.0e-50 203.8 157 73.9
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.3e-50 203.4 158 72.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.3e-50 203.4 157 71.3
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.3e-50 203.4 155 71.6
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 158 72.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.2e-50 202.6 157 69.4
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 5.0e-50 201.4 126 82.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 5.0e-50 201.4 157 70.1
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 5.0e-50 201.4 157 73.9
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.5e-50 201.1 161 68.9
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 6.5e-50 201.1 157 72.0
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.5e-50 201.1 157 70.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.1e-49 200.3 129 79.1
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 166 68.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 157 71.3
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 2.5e-49 199.1 123 82.9
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 3.2e-49 198.7 159 67.9
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.2e-49 198.7 161 68.3
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 5.5e-49 198.0 157 71.3
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 2.7e-48 195.7 118 84.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 3.6e-48 195.3 157 70.1
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 3.6e-48 195.3 124 79.8
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.6e-48 194.9 157 66.9
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 6.1e-48 194.5 157 69.4
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 6.1e-48 194.5 162 68.5
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 7.9e-48 194.1 157 66.2
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.0e-47 192.2 115 88.7
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.9e-47 191.8 133 76.7
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 5.1e-47 191.4 165 68.5
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 5.1e-47 191.4 164 69.5
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 5.1e-47 191.4 126 78.6
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 6.7e-47 191.0 164 67.7
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 6.7e-47 191.0 164 67.7
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 8.8e-47 190.7 132 76.5
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.1e-46 190.3 126 77.0
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.5e-46 189.9 164 66.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.5e-46 189.9 164 66.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.0e-46 189.5 158 69.0
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.0e-46 189.5 123 76.4
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.7e-46 188.0 166 67.5
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 5.7e-46 188.0 126 77.0
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 7.4e-46 187.6 164 67.1
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.3e-45 186.8 167 65.3
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.7e-45 186.4 115 80.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 4.8e-45 184.9 160 66.2
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 2.5e-41 172.6 128 74.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.6e-40 169.9 131 70.2
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 6.1e-40 167.9 128 71.1
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 7.9e-40 167.5 116 73.3
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.7e-39 164.5 128 70.3
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 4.4e-38 161.8 132 69.7
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 9.7e-38 160.6 128 69.5
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 6.3e-37 157.9 100 80.0
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 2.4e-36 156.0 132 65.2
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.4e-36 156.0 104 74.0
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.2e-35 153.7 157 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.5e-35 151.8 130 62.3
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.9e-34 149.1 104 70.2
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.5e-33 146.0 130 60.0
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.2e-33 145.6 138 55.8
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.7e-32 142.5 152 54.6
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.4e-30 135.2 142 55.6
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 7.5e-30 134.4 96 68.8
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 7.5e-30 134.4 86 74.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.7e-13 79.0 108 44.4
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.4e-12 77.0 64 67.2
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.4e-12 76.3 74 51.4
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 3.4e-06 55.8 107 37.4


User provided reference genes

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