Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 9.8e-178 626.7 323 100.0
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 1.7e-145 519.6 320 82.2
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 1.7e-145 519.6 319 82.8
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 4.9e-145 518.1 320 82.2
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 4.2e-144 515.0 323 80.2
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.7e-143 512.3 321 79.8
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 2.7e-143 512.3 319 81.2
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 7.9e-143 510.8 323 80.5
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 7.9e-143 510.8 323 80.5
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 7.9e-143 510.8 319 80.9
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.3e-142 509.2 321 80.1
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 6.7e-142 507.7 321 80.1
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.9e-141 506.1 321 80.1
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 1.9e-141 506.1 320 80.0
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.3e-141 505.4 319 79.9
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 4.3e-141 505.0 320 79.1
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 7.4e-141 504.2 320 80.3
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 7.4e-141 504.2 322 80.7
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 9.6e-141 503.8 320 79.4
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 1.6e-140 503.1 319 80.3
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 2.8e-140 502.3 319 79.6
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 4.8e-140 501.5 320 78.8
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 4.8e-140 501.5 320 79.4
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.8e-139 499.6 319 78.1
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.8e-139 499.6 320 78.4
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 3.1e-139 498.8 322 79.2
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 4.0e-139 498.4 320 78.8
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 6.9e-139 497.7 320 77.2
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 6.9e-139 497.7 318 80.2
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 1.2e-138 496.9 324 79.6
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.5e-138 496.5 320 78.4
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.0e-138 496.1 320 78.1
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 2.0e-138 496.1 319 76.5
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 2.6e-138 495.7 319 77.4
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 2.6e-138 495.7 321 80.1
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.4e-138 495.4 320 78.1
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 3.4e-138 495.4 320 78.8
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 6.5e-137 491.1 319 78.4
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 8.4e-137 490.7 322 77.3
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 1.9e-136 489.6 319 78.4
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.9e-136 489.6 320 78.4
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 4.2e-136 488.4 318 78.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 9.3e-136 487.3 318 77.0
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 3.5e-135 485.3 320 76.9
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 6.0e-135 484.6 320 78.1
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 6.0e-135 484.6 318 76.7
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.0e-134 483.8 319 77.4
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 1.3e-134 483.4 323 76.2
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 2.3e-134 482.6 319 77.7
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 2.3e-134 482.6 320 77.5
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 2.3e-134 482.6 321 75.7
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 6.7e-134 481.1 318 77.0
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.1e-133 480.3 319 75.9
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.1e-133 480.3 307 80.5
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 2.5e-133 479.2 320 75.6
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 2.5e-133 479.2 321 75.1
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 3.3e-133 478.8 319 75.5
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 4.3e-133 478.4 319 76.2
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 1.3e-132 476.9 309 76.1
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 1.3e-132 476.9 309 76.1
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.3e-132 476.9 318 75.5
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 1.3e-132 476.9 313 76.4
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.6e-132 476.5 319 75.5
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 8.2e-132 474.2 320 74.7
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.1e-131 473.8 319 76.2
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.1e-131 473.8 319 73.4
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 3.1e-131 472.2 320 73.4
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.1e-131 471.9 320 75.0
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 9.0e-131 470.7 318 74.5
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 5.9e-130 468.0 299 77.9
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.0e-129 467.2 307 76.2
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 2.2e-129 466.1 316 74.4
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 3.8e-129 465.3 305 77.0
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 5.0e-129 464.9 309 74.4
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 5.0e-129 464.9 309 74.4
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.4e-128 463.4 320 73.8
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 5.5e-128 461.5 304 75.3
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 7.2e-128 461.1 320 71.9
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 9.3e-128 460.7 319 72.7
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.6e-127 458.8 320 71.9
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 6.1e-127 458.0 319 73.7
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 7.9e-127 457.6 312 74.7
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.3e-126 456.8 312 74.7
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 1.8e-126 456.4 312 74.0
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 3.9e-126 455.3 318 72.6
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 5.1e-126 454.9 312 74.0
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 5.1e-126 454.9 292 78.1
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 1.5e-125 453.4 316 71.5
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.5e-125 453.4 319 71.8
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.5e-125 453.4 319 71.2
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.9e-125 453.0 317 71.0
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 2.5e-125 452.6 318 71.7
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 9.7e-125 450.7 316 71.2
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 2.8e-124 449.1 268 85.4
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 6.9e-123 444.5 311 72.3
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 1.2e-122 443.7 304 72.4
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.7e-121 439.9 269 83.3
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 6.5e-121 438.0 311 72.3
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.3e-118 429.5 320 71.9
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.8e-116 422.5 319 67.4
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 4.8e-116 421.8 301 70.4
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.1e-115 420.6 319 67.4
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.8e-115 419.9 319 66.8
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 5.3e-115 418.3 318 67.6
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 6.9e-115 417.9 261 80.5
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.5e-114 416.8 309 67.0
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.6e-114 416.0 281 76.5
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.3e-113 413.7 302 69.9
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.1e-112 410.6 311 65.3
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 7.2e-112 407.9 265 75.8
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 2.1e-103 379.8 319 64.9
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.2e-101 374.0 223 84.8
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.2e-101 374.0 267 72.7
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 2.0e-98 363.2 308 59.7
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 2.9e-97 359.4 260 70.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 5.2e-94 348.6 307 58.3
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.5e-93 347.1 309 58.6
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 4.8e-92 342.0 308 54.9
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 1.5e-88 330.5 233 73.8
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 7.5e-85 318.2 264 67.8
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 2.4e-83 313.2 307 51.8
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 1.6e-71 273.9 336 45.5
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 2.3e-70 270.0 318 47.2
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 6.2e-31 139.0 288 33.3
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 5.5e-27 125.9 80 83.8
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 1.5e-16 91.3 256 27.7
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 1.4e-09 68.2 217 26.3
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 5.1e-09 66.2 38 84.2


User provided reference genes

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