Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 4.8e-213 744.2 366 100.0
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 2.9e-194 681.8 338 99.4
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 7.5e-158 560.8 340 83.5
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 4.1e-148 528.5 339 78.5
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 4.7e-144 515.0 338 76.6
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 4.7e-144 515.0 338 76.6
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 6.8e-143 511.1 338 75.7
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.4e-140 503.4 340 75.9
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-140 502.7 340 75.0
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-140 502.7 340 75.0
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-140 502.7 340 75.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.0e-138 495.7 340 74.1
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.9e-137 493.0 338 74.9
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 7.3e-137 491.1 333 73.3
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 4.0e-135 485.3 339 71.4
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 8.9e-135 484.2 337 72.1
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.9e-133 478.4 340 72.4
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 5.4e-132 474.9 335 71.6
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.6e-131 471.9 340 71.8
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-130 470.3 340 71.5
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.5e-129 466.1 339 71.4
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 3.3e-129 465.7 339 70.5
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 5.6e-129 464.9 338 69.8
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.8e-128 462.6 338 70.7
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.6e-126 456.1 332 70.2
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 9.9e-126 454.1 332 69.9
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.4e-124 450.3 334 69.5
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 6.0e-123 444.9 335 69.3
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.8e-119 433.3 338 64.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 2.4e-119 433.0 338 63.9
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 4.0e-119 432.2 338 63.9
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 5.3e-119 431.8 339 65.2
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.0e-119 431.0 340 66.2
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 1.2e-118 430.6 338 63.6
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 4.9e-117 425.2 333 67.9
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.3e-112 410.6 320 66.6
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.6e-110 401.4 338 64.2
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.6e-110 401.4 338 64.2
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.6e-110 401.4 338 64.2
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.6e-110 401.4 338 64.2
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.6e-110 401.4 338 64.2
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.9e-109 398.7 285 71.9
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.9e-109 398.7 340 63.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.6e-107 393.7 338 62.1
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 6.0e-107 391.7 333 59.8
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.9e-106 389.0 339 60.8
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 5.9e-102 375.2 339 59.9
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 2.1e-99 366.7 314 65.6
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 6.1e-99 365.2 341 58.1
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.8e-98 363.6 282 67.7
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.3e-98 363.2 310 60.6
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 6.7e-98 361.7 233 76.0
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-95 354.0 342 59.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.0e-95 351.3 255 70.2
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.8e-93 345.9 248 71.8
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 8.8e-90 334.7 335 56.7
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 3.6e-83 312.8 339 52.5
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.9e-82 309.3 293 58.4
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 9.7e-81 304.7 213 67.6
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 9.7e-81 304.7 213 67.6
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 9.7e-81 304.7 213 67.6
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 9.7e-81 304.7 213 67.6
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 9.7e-81 304.7 213 67.6
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-80 304.3 255 62.7
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.8e-80 303.1 340 53.5
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.5e-76 290.0 264 58.7
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.5e-76 290.0 264 58.7
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 5.5e-76 288.9 242 64.0
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 2.3e-74 283.5 216 66.2
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 3.1e-71 273.1 224 62.1
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.2e-68 262.7 170 76.5
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 3.6e-67 259.6 185 71.9
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 3.4e-65 253.1 220 60.9
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.2e-64 250.4 306 48.4
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 5.4e-63 245.7 159 76.7
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 2.9e-61 240.0 144 78.5
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 4.7e-59 232.6 159 73.0
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 8.3e-56 221.9 145 75.2
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-55 221.5 338 42.6
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 4.1e-55 219.5 246 48.8
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 7.0e-55 218.8 142 76.1
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-54 216.9 151 72.8
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 3.3e-52 209.9 143 75.5
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.0e-50 204.9 218 55.0
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 2.3e-50 203.8 122 81.1
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.7e-48 196.4 263 46.4
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 3.0e-45 186.8 128 75.0
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.5e-44 184.5 199 53.3
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 2.5e-44 183.7 169 60.4
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 1.6e-43 181.0 127 67.7
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 6.8e-42 175.6 120 70.8
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.3e-40 171.4 194 50.0
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 5.4e-39 166.0 143 62.2
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 1.1e-36 158.3 115 68.7
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 7.5e-33 145.6 114 60.5
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 6.4e-32 142.5 134 55.2
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 8.3e-32 142.1 167 50.3
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 8.3e-32 142.1 102 66.7
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 5.4e-31 139.4 323 35.9
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 1.6e-30 137.9 85 77.6
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 7.8e-30 135.6 133 60.9
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.7e-29 134.4 121 57.0
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-26 123.6 164 47.0
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.0e-26 123.2 79 75.9
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.0e-26 123.2 86 74.4
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 1.2e-25 121.7 114 57.0
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.0e-25 120.9 159 42.8
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 4.9e-24 116.3 115 53.9
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 1.4e-23 114.8 83 69.9
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 7.1e-23 112.5 84 66.7
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-22 110.5 130 50.0
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 6.0e-22 109.4 74 66.2
Nn3g16148 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.6e-19 101.3 83 66.3
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 7.6e-17 92.4 66 68.2
SMO086G0023 Selaginella moellendorffii HOM05D004473 ORTHO05D005652 2.4e-15 87.4 234 30.8
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.6e-14 83.2 53 83.0
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 1.3e-13 81.6 68 66.2
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.0e-13 80.5 46 73.9
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 1.1e-12 78.6 43 83.7
FAN24G2630 Fragaria x ananassa HOM05D004473 ORTHO05D005652 2.5e-12 77.4 84 54.8
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 4.3e-12 76.6 59 62.7
BraSC58t46474Z Brassica rapa HOM05D004473 ORTHO05D005652 9.6e-12 75.5 50 66.0
Os11g0517350 Oryza sativa ssp. japonica HOM05D004473 ORTHO05D005652 2.8e-11 73.9 62 58.1
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 8.1e-11 72.4 78 52.6
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 2.4e-10 70.9 45 71.1
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.0e-10 70.1 97 48.5
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 6.9e-10 69.3 58 62.1
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 9.0e-10 68.9 47 70.2
Gorai.006G008300 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.4e-07 60.8 95 42.1
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 7.1e-07 59.3 51 54.9
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 7.1e-07 59.3 40 80.0
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.2e-06 58.5 56 58.9
Mapoly1406s0001 Marchantia polymorpha HOM05D004473 ORTHO05D005652 4.6e-06 56.6 57 45.6


User provided reference genes

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