Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 2.5e-267 924.9 454 100.0
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 3.1e-201 705.3 339 99.1
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.0e-111 407.9 488 50.8
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.6e-111 404.8 494 48.8
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.6e-109 400.6 445 54.2
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.0e-107 393.7 485 48.7
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 5.4e-97 359.0 499 46.9
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 7.0e-89 332.0 344 57.8
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 7.0e-89 332.0 500 44.6
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-88 330.1 477 45.9
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-88 330.1 477 45.9
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-88 330.1 477 45.9
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-88 330.1 477 45.9
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 9.5e-86 321.6 506 43.1
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.3e-74 284.6 343 51.6
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 8.4e-74 282.0 378 46.6
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 1.9e-73 280.8 500 40.6
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 4.7e-69 266.2 501 39.7
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 8.1e-69 265.4 501 39.7
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-68 263.1 360 46.7
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.7e-66 257.7 457 40.3
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 2.4e-65 253.8 424 41.5
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 5.1e-55 219.5 391 43.0
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.6e-54 216.1 391 39.1
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.6e-54 215.3 367 39.5
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-53 213.8 391 38.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.4e-52 211.5 474 35.2
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.4e-52 211.5 474 35.2
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 4.0e-52 209.9 472 34.5
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-51 208.0 218 56.0
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 3.4e-51 206.8 474 34.8
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 3.4e-51 206.8 470 36.4
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 4.9e-50 203.0 399 39.8
Lj9P89T23 Lonicera japonica HOM05D001070 ORTHO05D005132 4.2e-49 199.9 120 90.8
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-47 194.5 372 38.7
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 9.6e-46 188.7 320 39.7
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.3e-45 188.3 260 49.2
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.8e-45 187.2 457 34.8
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.4e-44 184.1 207 52.7
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-44 183.3 256 43.4
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-44 183.3 256 43.4
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.4e-41 174.9 465 32.9
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 1.9e-41 174.5 369 35.2
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.1e-40 171.0 347 35.4
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.9e-39 166.8 326 35.9
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-37 161.0 366 35.2
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.3e-36 156.4 245 41.2
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.0e-34 149.8 299 34.4
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.8e-28 131.3 215 37.7
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 2.6e-27 127.5 104 60.6
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.4e-27 127.1 206 45.6
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.1e-24 116.3 131 53.4
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 1.1e-22 112.1 150 41.3
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 1.5e-22 111.7 254 30.7
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 5.7e-22 109.8 137 49.6
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 9.7e-22 109.0 119 55.5
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 6.3e-21 106.3 164 42.7
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.1e-20 105.5 139 41.7
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.2e-16 92.0 175 44.0
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.6e-16 91.7 123 41.5
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.1e-16 91.3 102 45.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.1e-16 91.3 112 51.8
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 4.7e-16 90.1 92 55.4
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.1e-14 85.5 86 59.3
GSVIVG01029921001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.6e-14 84.3 160 45.6
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.3e-13 82.0 87 51.7
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.2e-13 81.3 162 36.4
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.7e-13 80.5 78 51.3
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.8e-12 78.2 100 39.0
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.0e-11 74.7 67 58.2
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.5e-11 73.6 70 48.6
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 2.9e-10 70.9 110 36.4
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.5e-10 69.3 58 60.3
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.2e-09 67.0 38 71.1
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.7e-08 63.5 109 35.8
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 6.1e-08 63.2 130 32.3
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-07 61.2 158 28.5
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-07 61.2 158 28.5
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 3.0e-07 60.8 82 43.9
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 6.8e-07 59.7 114 33.3
Medtr1g037160 Medicago truncatula HOM05D001070 ORTHO05D005132 8.8e-07 59.3 179 37.4
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.6e-06 57.8 85 40.0
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.7e-06 55.8 51 47.1


User provided reference genes

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