Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1230T116 Lonicera japonica HOM05D009131 ORTHO05D011137 2.7e-100 368.6 181 100.0
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 1.4e-35 153.7 137 59.9
LjContig00315g0007090 Lotus japonicus HOM05D009131 ORTHO05D011137 4.4e-34 148.7 176 48.3
LjContig00439g0010199 Lotus japonicus HOM05D009131 ORTHO05D011137 4.4e-34 148.7 176 48.3
SGA_v2.0_scaffold477G52170 Striga asiatica HOM05D009131 ORTHO05D011137 5.0e-30 135.2 162 43.8
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.5e-29 133.7 156 49.4
PGSC0003DMG400034591 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.9e-29 133.3 170 45.3
PGSC0003DMG402008771 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.9e-29 133.3 170 45.3
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.3e-29 132.5 156 45.5
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.3e-29 132.5 156 45.5
PGR028G0024 Punica granatum HOM05D009131 ORTHO05D011137 9.5e-29 131.0 168 44.6
PGR069G0015 Punica granatum HOM05D009131 ORTHO05D011137 9.5e-29 131.0 168 44.6
PGR069G0016 Punica granatum HOM05D009131 ORTHO05D011137 9.5e-29 131.0 168 44.6
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 9.5e-29 131.0 168 44.6
Solyc00g500099.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 2.8e-28 129.4 157 46.5
Solyc00g500272.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 2.8e-28 129.4 157 46.5
Solyc00g500318.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 2.8e-28 129.4 157 46.5
Solyc00g500361.1 Solanum lycopersicum HOM05D001325 ORTHO05D011137 2.8e-28 129.4 157 46.5
Lsat_1_v5_gn_1_2620 Lactuca sativa HOM05D009131 ORTHO05D011137 6.2e-28 128.3 168 44.6
Lsat_1_v5_gn_7_25441 Lactuca sativa HOM05D009131 ORTHO05D011137 6.2e-28 128.3 168 44.6
Solyc00g500116.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 1.8e-27 126.7 157 45.9
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.0e-26 123.2 170 40.0
CAN.G950.4 Capsicum annuum HOM05D009131 ORTHO05D011137 2.6e-26 122.9 177 40.1
BolSC28t60388H Brassica oleracea HOM05D009131 ORTHO05D011137 2.2e-25 119.8 151 44.4
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 2.2e-25 119.8 154 42.9
Ah.03g144220 Amaranthus hybridus HOM05D009131 ORTHO05D011137 4.1e-24 115.5 170 38.2
CARHR287230 Cardamine hirsuta HOM05D009131 ORTHO05D011137 1.2e-23 114.0 145 44.1
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 6.0e-23 111.7 162 38.9
A04p09520 Brassica napus HOM05D009131 ORTHO05D011137 1.0e-22 110.9 150 42.7
Lj2P1221T105 Lonicera japonica HOM05D009131 ORTHO05D011137 1.0e-22 110.9 57 100.0
HanXRQMTg0579611 Helianthus annuus HOM05D009131 ORTHO05D011137 3.9e-22 109.0 152 40.8
Lsat_1_v5_gn_5_16481 Lactuca sativa HOM05D009131 ORTHO05D011137 5.6e-21 105.1 133 46.6
Solyc00g500170.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 4.0e-19 99.0 148 39.9
unitig_87.g27976 Utricularia gibba HOM05D009131 ORTHO05D011137 3.2e-16 89.4 142 35.9
MELO3C027715.2 Cucumis melo HOM05D000743 ORTHO05D011137 1.2e-15 87.4 151 35.1
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 1.3e-14 84.0 151 32.5
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 6.6e-14 81.6 135 37.0
CAN.G1109.13 Capsicum annuum HOM05D009131 ORTHO05D011137 4.7e-12 75.5 100 44.0
Solyc02g085520.4 Solanum lycopersicum HOM05D003478 ORTHO05D004196 4.7e-12 75.5 80 48.8
CAN.G1167.18 Capsicum annuum HOM05D009131 ORTHO05D011137 2.0e-10 70.1 89 42.7
Eucgr.I01853 Eucalyptus grandis HOM05D009131 ORTHO05D011137 6.4e-09 65.1 67 47.8
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 1.9e-08 63.5 73 41.1
CsaV3_UNG208200 Cucumis sativus L. HOM05D009131 ORTHO05D011137 9.3e-08 61.2 160 29.4
CAN.G1923.1 Capsicum annuum HOM05D009131 ORTHO05D011137 1.6e-07 60.5 66 48.5
Sopen00g005760 Solanum pennellii HOM05D009131 ORTHO05D030617 1.6e-07 60.5 77 45.5
Actinidia34814 Actinidia chinensis HOM05D009131 ORTHO05D011137 1.7e-06 57.0 146 34.9


User provided reference genes

Program Settings