Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 9.2e-92 340.1 162 100.0
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 2.2e-85 318.9 157 96.2
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 2.1e-83 312.4 162 92.0
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 2.1e-83 312.4 162 92.0
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 1.6e-80 302.8 157 90.4
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 3.1e-79 298.5 157 90.4
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.9e-79 297.4 157 89.8
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 9.9e-78 293.5 157 91.1
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 1.4e-71 273.1 148 88.5
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.4e-68 262.3 132 93.9
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 1.8e-66 256.1 137 89.1
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 2.3e-66 255.8 135 91.1
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 3.0e-66 255.4 150 82.7
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 3.3e-65 251.9 126 95.2
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 1.6e-64 249.6 134 90.3
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 1.6e-64 249.6 134 90.3
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.1e-64 249.2 129 91.5
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 2.8e-64 248.8 168 78.0
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 2.8e-64 248.8 168 78.0
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.5e-60 235.7 122 91.8
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 3.5e-59 231.9 165 74.5
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 1.9e-57 226.1 123 89.4
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 4.1e-55 218.4 134 81.3
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 3.5e-51 205.3 102 94.1
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 5.1e-50 201.4 109 89.0
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 5.7e-49 198.0 105 90.5
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 2.2e-48 196.1 144 72.9
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 4.8e-48 194.9 97 92.8
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 8.2e-48 194.1 99 91.9
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 1.5e-46 189.9 156 66.0
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 7.7e-46 187.6 105 85.7
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 2.1e-43 179.5 100 86.0
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 2.7e-43 179.1 99 87.9
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 5.3e-39 164.9 98 79.6
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea HOM05D005210 ORTHO05D010286 1.8e-31 139.8 65 100.0
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 1.0e-29 134.0 62 100.0
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 1.1e-28 130.6 130 61.5
TPR.G28261 Trifolium pratense HOM05D005210 ORTHO05D010286 6.1e-27 124.8 65 90.8
Glyma.12G155200 Glycine max HOM05D005210 ORTHO05D010286 3.3e-25 119.0 65 87.7
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 2.4e-23 112.8 101 62.4
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 5.3e-23 111.7 103 61.2
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 1.9e-20 103.2 66 80.3
TPR.G24723 Trifolium pratense HOM05D005210 ORTHO05D010286 2.7e-19 99.4 107 52.3
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 6.1e-19 98.2 56 85.7
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 8.8e-18 94.4 100 52.0
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 6.3e-16 88.2 53 81.1
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 4.2e-12 75.5 67 59.7
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 6.1e-11 71.6 60 65.0
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6


User provided reference genes

Program Settings