Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 4.2e-98 361.3 175 100.0
Dinv06671 Davidia involucrata HOM05D011380 ORTHO05D019448 1.3e-54 216.9 108 93.5
Gorai.001G165500 Gossypium raimondii HOM05D011380 ORTHO05D016005 2.0e-47 193.0 152 67.1
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.1e-34 150.6 114 69.3
SGA_v2.0_scaffold400G50864 Striga asiatica HOM05D011380 ORTHO05D019448 2.7e-28 129.4 82 76.8
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 3.6e-17 92.4 133 39.8
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 3.6e-17 92.4 85 51.8
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-16 88.2 89 48.3
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-16 88.2 89 48.3
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-16 88.2 89 48.3
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-16 88.2 89 48.3
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-16 88.2 89 48.3
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.8e-16 88.2 97 42.3
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 1.2e-15 87.4 94 42.6
Nitab4.5_0013560g0040 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.6e-15 86.3 79 62.0
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 4.4e-15 85.5 85 49.4
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 4.4e-15 85.5 78 47.4
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 9.9e-15 84.3 107 45.8
Actinidia34933 Actinidia chinensis HOM05D011380 ORTHO05D019448 2.9e-14 82.8 41 95.1
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 3.7e-14 82.4 94 44.7
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 3.7e-14 82.4 81 48.1
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.4e-13 80.5 48 85.4
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 3.2e-13 79.3 87 46.0
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 5.4e-13 78.6 89 44.9
Nitab4.5_0012599g0070 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.4e-13 78.6 48 83.3
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 7.1e-13 78.2 125 36.0
MBI03_g45449_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 9.2e-13 77.8 99 47.5
Nitab4.5_0004300g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.6e-12 77.0 59 71.2
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 2.1e-12 76.6 77 51.9
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 2.1e-12 76.6 78 46.2
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 2.1e-12 76.6 87 40.2
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.7e-12 76.3 67 47.8
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 3.5e-12 75.9 77 48.1
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 3.5e-12 75.9 76 46.1
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 6.0e-12 75.1 79 46.8
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.0e-11 74.3 125 34.4
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-11 74.3 79 46.8
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.0e-11 74.3 125 34.4
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 1.0e-11 74.3 85 45.9
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 1.7e-11 73.6 81 45.7
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 2.3e-11 73.2 81 44.4
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 2.3e-11 73.2 96 40.6
Nitab4.5_0010586g0020 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.0e-11 72.8 51 72.5
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 6.6e-11 71.6 78 44.9
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.1e-10 70.9 55 54.5
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.9e-10 70.1 73 46.6
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-10 69.3 67 50.7
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-10 69.3 67 50.7
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-10 69.3 67 50.7
Nitab4.5_0000866g0220 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.3e-10 69.3 48 77.1
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.2e-09 67.4 56 50.0
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 6.2e-09 65.1 56 50.0
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.8e-08 63.5 66 47.0
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.8e-08 63.5 66 47.0
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 4.0e-08 62.4 73 42.5
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 4.0e-08 62.4 59 49.2
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 4.0e-08 62.4 59 49.2
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 5.2e-08 62.0 59 44.1
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 8.9e-08 61.2 54 48.1
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 3.4e-07 59.3 56 50.0
Lj2P1229T103 Lonicera japonica HOM05D002660 ORTHO05D003902 1.3e-06 57.4 43 58.1
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 2.9e-06 56.2 78 41.0


User provided reference genes

Program Settings