Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 6.1e-111 404.1 191 100.0
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 2.9e-108 395.2 191 97.9
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 2.9e-108 395.2 191 97.9
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.4e-107 392.1 191 97.4
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 5.4e-107 391.0 191 97.4
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 9.2e-107 390.2 191 96.3
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.0e-106 389.0 191 96.9
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.5e-106 388.3 189 97.4
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 7.8e-106 387.1 191 96.9
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 7.8e-106 387.1 191 96.9
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 7.8e-106 387.1 191 96.9
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.0e-105 386.7 191 96.3
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.3e-105 386.3 191 96.3
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.7e-105 386.0 191 96.3
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 2.3e-105 385.6 191 96.3
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 3.0e-105 385.2 191 96.3
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 3.0e-105 385.2 191 96.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 95.8
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 96.3
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 96.3
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 1.5e-104 382.9 191 95.8
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 3.3e-104 381.7 191 94.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 3.3e-104 381.7 191 95.3
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.2e-103 379.8 191 94.8
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 8.0e-103 377.1 188 94.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.2e-102 374.4 188 93.1
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 5.8e-101 370.9 191 92.7
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.9e-100 368.6 191 92.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.7e-100 368.2 184 95.1
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-99 366.7 188 92.6
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.9e-99 365.9 189 93.1
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.5e-98 361.7 179 95.0
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 6.6e-97 357.5 170 100.0
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-95 352.8 188 88.3
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-94 350.1 170 98.2
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.8e-94 349.4 166 99.4
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-94 349.4 170 98.2
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-94 349.4 170 98.2
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 3.1e-94 348.6 170 97.6
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 2.0e-93 345.9 170 97.1
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 3.4e-93 345.1 170 97.6
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 5.8e-93 344.4 186 88.2
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 5.8e-93 344.4 186 88.2
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-92 343.2 168 97.6
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 2.9e-92 342.0 170 96.5
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 8.3e-92 340.5 168 97.0
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.9e-91 339.3 170 96.5
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.9e-91 339.3 165 97.0
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 5.4e-91 337.8 170 95.3
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.1e-90 335.9 167 96.4
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.7e-89 332.8 170 94.1
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-86 323.6 170 91.8
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 5.2e-86 321.2 185 83.8
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-86 320.9 177 88.1
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.6e-85 318.9 160 94.4
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-84 315.1 163 92.6
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.4e-83 312.4 166 91.0
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 3.2e-83 312.0 170 90.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-83 310.8 168 88.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.0e-81 307.0 191 81.2
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 8.6e-81 303.9 179 83.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-80 303.1 180 81.7
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-80 302.0 165 87.9
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 1.6e-79 299.7 153 94.1
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-79 299.7 177 81.9
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-79 299.7 164 87.2
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-77 290.4 169 85.2
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-77 290.4 164 86.6
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 2.2e-76 289.3 170 83.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-76 287.7 188 73.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.1e-75 287.0 146 95.2
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-75 284.6 141 97.2
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-75 284.6 141 97.2
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-73 278.1 135 97.8
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-70 270.0 138 94.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 1.7e-68 263.1 170 80.0
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-68 262.7 135 93.3
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-67 258.1 155 81.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-66 256.5 138 90.6
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-66 256.5 138 90.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-66 256.1 142 86.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-65 252.7 132 91.7
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-64 249.6 131 90.8
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-64 247.7 148 82.4
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 4.5e-61 238.4 130 90.0
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-60 236.1 136 86.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 4.9e-60 235.0 192 66.1
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 7.1e-59 231.1 136 83.8
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.6e-58 229.9 192 65.6
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-56 223.8 138 83.3
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-55 219.9 127 85.0
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-55 218.8 135 81.5
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-54 216.1 112 92.0
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 3.1e-54 215.7 185 62.7
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 6.9e-54 214.5 109 93.6
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 3.4e-53 212.2 99 100.0
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.5e-53 211.8 148 73.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 7.6e-53 211.1 114 90.4
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.4e-52 207.6 138 76.1
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.9e-51 206.5 100 97.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.2e-50 203.8 99 97.0
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.0e-49 200.7 97 96.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.3e-49 200.3 96 97.9
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 1.1e-48 197.2 109 88.1
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-48 197.2 104 90.4
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-47 192.6 115 84.3
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.2e-45 187.2 145 60.7
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.2e-45 187.2 184 52.2
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-45 186.8 100 89.0
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-45 184.5 96 89.6
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.9e-43 179.9 99 86.9
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 7.2e-43 177.9 102 84.3
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.1e-42 176.4 143 64.3
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-42 174.9 94 88.3
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.8e-41 173.3 89 92.1
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 5.1e-41 171.8 79 98.7
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-40 169.5 108 77.8
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-38 164.1 164 56.7
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-37 159.1 132 63.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 7.7e-37 157.9 172 51.7
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-36 157.5 87 85.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-36 157.5 87 85.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.1e-35 154.1 74 97.3
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.1e-35 154.1 74 97.3
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 4.2e-35 152.1 72 95.8
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 3.6e-34 149.1 175 45.1
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.6e-34 148.7 150 56.0
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-33 146.7 81 85.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.9e-33 145.6 71 94.4
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 8.8e-33 144.4 86 79.1
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.4e-32 141.4 72 91.7
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 9.7e-32 141.0 68 92.6
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-32 141.0 74 89.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-31 139.8 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-31 138.7 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-31 138.3 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-31 137.9 74 87.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-30 137.1 135 59.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-30 137.1 135 59.3
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.8e-30 136.7 74 86.5
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-29 134.0 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-29 134.0 74 86.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-29 132.1 72 86.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-28 129.8 74 85.1
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-28 128.6 74 85.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 5.0e-28 128.6 91 71.4
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-27 127.1 71 85.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-27 124.4 74 82.4
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 6.7e-25 118.2 57 94.7
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 9.7e-24 114.4 69 81.2
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.2e-23 111.3 64 82.8
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 7.0e-22 108.2 59 91.5
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 3.5e-21 105.9 61 88.5
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 8.5e-20 101.3 51 92.2
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-18 96.7 72 68.1
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-17 92.4 69 68.1
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-17 91.3 111 49.5
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-16 90.5 58 77.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-14 84.3 44 90.9
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-14 81.3 181 34.8
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.5e-13 79.3 45 80.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-11 73.6 50 72.0
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 4.0e-09 65.9 34 85.3
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.0e-08 63.5 35 82.9
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 4.4e-08 62.4 30 93.3
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-08 61.6 60 58.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-07 60.5 34 82.4
Medtr8g059730 Medicago truncatula HOM05D001560 ORTHO05D004675 3.7e-07 59.3 43 60.5


User provided reference genes

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