Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 3.1e-139 498.4 244 100.0
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 1.4e-80 303.5 200 80.5
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 2.2e-76 289.7 243 56.4
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.2e-73 279.6 243 55.1
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 2.9e-73 279.3 239 57.3
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 6.5e-73 278.1 237 56.1
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 6.1e-71 271.6 239 54.0
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 6.1e-71 271.6 239 54.0
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 1.4e-70 270.4 243 52.7
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 2.6e-69 266.2 234 53.8
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 9.7e-69 264.2 246 52.8
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 2.8e-68 262.7 236 54.7
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 3.1e-67 259.2 240 50.8
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.3e-67 258.5 242 53.3
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.3e-67 258.5 242 53.3
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.3e-67 258.5 242 53.3
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 1.1e-64 250.8 241 51.0
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.1e-63 245.0 242 51.2
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 6.1e-63 245.0 207 54.6
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 2.3e-62 243.0 238 52.5
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 2.2e-60 236.5 205 54.1
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.3e-59 231.9 242 48.8
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 2.6e-58 229.6 236 50.4
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.5e-56 223.8 242 49.2
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.8e-52 209.5 239 46.9
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 4.1e-51 205.7 236 45.8
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 3.8e-49 199.1 206 50.5
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.1e-48 197.6 199 52.8
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 9.4e-48 194.5 258 39.9
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.5e-45 187.2 237 42.2
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.7e-44 183.7 199 50.8
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 4.5e-42 175.6 211 45.5
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 1.2e-37 161.0 143 50.3
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 1.8e-35 153.7 211 42.7
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 5.0e-33 145.6 125 52.8
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 2.1e-31 140.2 119 50.4
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 6.1e-31 138.7 93 62.4
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.8e-29 131.3 125 54.4
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.3e-28 128.3 142 47.2
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.4e-27 125.6 92 63.0
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 9.2e-27 124.8 149 43.0
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.2e-26 124.4 94 61.7
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 6.0e-26 122.1 98 61.2
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 1.3e-25 120.9 99 54.5
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 1.3e-25 120.9 99 54.5
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.5e-24 117.5 110 52.7
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 1.7e-20 104.0 153 37.9
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 2.2e-20 103.6 120 42.5
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 5.4e-19 99.0 106 49.1
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 3.9e-17 92.8 75 60.0
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 7.3e-16 88.6 82 56.1
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 2.1e-15 87.0 78 53.8
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 3.1e-14 83.2 60 51.7
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 4.0e-14 82.8 106 44.3
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 9.9e-13 78.2 60 58.3
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-10 71.2 45 64.4
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-10 71.2 45 64.4
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-10 71.2 45 64.4
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 7.3e-08 62.0 61 50.8
Peaxi162Scf00625g00036 Petunia axillaris HOM05D002660 ORTHO05D003902 7.3e-08 62.0 62 50.0
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 1.8e-06 57.4 38 55.3


User provided reference genes

Program Settings