Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1207T37 Lonicera japonica HOM05D009103 ORTHO05D010883 1.0e-103 380.2 205 100.0
Lj2P1207T40 Lonicera japonica HOM05D009103 ORTHO05D010883 1.8e-52 209.9 204 61.3
DCAR_002888 Daucus carota HOM05D009103 ORTHO05D010883 3.0e-23 112.8 149 40.9
Nitab4.5_0011351g0010 Nicotiana tabacum HOM05D009103 ORTHO05D010883 3.0e-23 112.8 206 36.4
CAN.G388.45 Capsicum annuum HOM05D009103 ORTHO05D010883 8.8e-23 111.3 134 41.8
ECA240G2674 Erigeron canadensis HOM05D003151 ORTHO05D003723 2.6e-22 109.8 110 47.3
Nitab4.5_0000429g0070 Nicotiana tabacum HOM05D009103 ORTHO05D010883 4.4e-22 109.0 206 35.9
Nitab4.5_0000721g0100 Nicotiana tabacum HOM05D009103 ORTHO05D010883 4.4e-22 109.0 105 49.5
Nitab4.5_0004995g0030 Nicotiana tabacum HOM05D009103 ORTHO05D010883 4.4e-22 109.0 105 49.5
Nitab4.5_0000429g0050 Nicotiana tabacum HOM05D009103 ORTHO05D010883 7.5e-22 108.2 145 41.4
CAN.G674.32 Capsicum annuum HOM05D009103 ORTHO05D010883 2.2e-21 106.7 137 40.1
Sopen10g032180 Solanum pennellii HOM05D009103 ORTHO05D010883 2.8e-21 106.3 112 42.0
Solyc10g081670.2 Solanum lycopersicum HOM05D009103 ORTHO05D010883 4.8e-21 105.5 109 42.2
PGSC0003DMG400021384 Solanum tuberosum HOM05D009103 ORTHO05D010883 8.3e-21 104.8 136 41.2
PGSC0003DMG400028225 Solanum tuberosum HOM05D009103 ORTHO05D010883 8.3e-21 104.8 196 32.7
Lsat_1_v5_gn_7_37481 Lactuca sativa HOM05D009103 ORTHO05D010883 1.4e-20 104.0 110 40.0
Nitab4.5_0004995g0020 Nicotiana tabacum HOM05D009103 ORTHO05D010883 5.4e-20 102.1 197 37.1
Nitab4.5_0007076g0010 Nicotiana tabacum HOM05D009103 ORTHO05D010883 1.6e-19 100.5 206 34.0
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 3.5e-19 99.4 111 43.2
Lj2P1207T39 Lonicera japonica HOM05D009103 ORTHO05D010883 1.0e-18 97.8 62 75.8
Lsat_1_v5_gn_5_145461 Lactuca sativa HOM05D009103 ORTHO05D010883 1.3e-18 97.4 193 35.2
Peaxi162Scf00203g00044 Petunia axillaris HOM05D009103 ORTHO05D010883 1.1e-17 94.4 199 35.2
Nitab4.5_0025471g0010 Nicotiana tabacum HOM05D009103 ORTHO05D010883 1.5e-17 94.0 97 45.4
ECA240G2709 Erigeron canadensis HOM05D009103 ORTHO05D010883 4.2e-17 92.4 104 36.5
Sopen10g032190 Solanum pennellii HOM05D009103 ORTHO05D010883 9.5e-17 91.3 193 33.7
Sopen01g002730 Solanum pennellii HOM05D009103 ORTHO05D010883 1.2e-16 90.9 149 36.2
CAN.G674.30 Capsicum annuum HOM05D009103 ORTHO05D010883 2.8e-16 89.7 198 35.4
ECA234G2649 Erigeron canadensis HOM05D009103 ORTHO05D010883 4.7e-16 89.0 146 34.9
Oeu020158.1 Olea europaea HOM05D009103 ORTHO05D010883 4.7e-16 89.0 87 46.0
PGSC0003DMG400021377 Solanum tuberosum HOM05D009103 ORTHO05D010883 1.2e-14 84.3 199 34.7
Peaxi162Scf00210g00163 Petunia axillaris HOM05D009103 ORTHO05D010883 2.6e-14 83.2 146 34.2
CAN.G388.47 Capsicum annuum HOM05D009103 ORTHO05D010883 7.5e-14 81.6 108 39.8
Lj2P253T23 Lonicera japonica HOM05D013581 ORTHO05D010883 9.8e-14 81.3 199 31.7
Sopen01g002750 Solanum pennellii HOM05D009103 ORTHO05D010883 4.9e-13 79.0 121 35.5
Lj2P253T50 Lonicera japonica HOM05D013581 ORTHO05D010883 6.3e-13 78.6 199 31.2
ECA240G2913 Erigeron canadensis HOM05D009103 ORTHO05D010883 8.3e-13 78.2 109 30.3
Lj5A712G30 Lonicera japonica HOM05D013581 ORTHO05D010883 1.1e-12 77.8 93 36.6
Lsat_1_v5_gn_7_37441 Lactuca sativa HOM05D009103 ORTHO05D010883 3.1e-12 76.3 116 31.0
Lj5C712T6 Lonicera japonica HOM05D013581 ORTHO05D010883 5.4e-12 75.5 139 28.8
Dinv33126 Davidia involucrata HOM05D001340 ORTHO05D002318 3.5e-11 72.8 201 33.8
CAN.G674.31 Capsicum annuum HOM05D009103 ORTHO05D010883 7.8e-11 71.6 195 27.7
Lj5P710T18 Lonicera japonica HOM05D013581 ORTHO05D010883 5.0e-10 68.9 199 28.1
Lj9C525T17 Lonicera japonica HOM05D013581 ORTHO05D010883 1.5e-09 67.4 89 31.5
Lj2C253T14 Lonicera japonica HOM05D013581 ORTHO05D010883 9.5e-09 64.7 194 25.8
Dinv10111 Davidia involucrata HOM05D019127 ORTHO05D023248 1.4e-07 60.8 116 29.3
Migut.L01844 Erythranthe guttata HOM05D009103 ORTHO05D010883 1.4e-07 60.8 182 28.6
Dinv34553 Davidia involucrata HOM05D056807 ORTHO05D010883 1.2e-06 57.8 104 29.8
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 1.2e-06 57.8 77 35.1
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 4.4e-06 55.8 79 38.0
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 5.7e-06 55.5 68 38.2
Hma1.2p1_0414F.1_g147630 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 9.8e-06 54.7 70 34.3


User provided reference genes

Program Settings