Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P100T19 Lonicera japonica HOM05D011311 ORTHO05D000009 3.4e-70 268.1 125 100.0
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 3.0e-42 175.3 111 77.5
Lj8P480T12 Lonicera japonica HOM05D011311 ORTHO05D000009 2.3e-37 159.1 91 84.6
Lj5P277T26 Lonicera japonica HOM05D011311 ORTHO05D000009 1.1e-36 156.8 94 80.9
Lj8P416T18 Lonicera japonica HOM05D011311 ORTHO05D000009 8.9e-34 147.1 125 60.0
Lj8P188T26 Lonicera japonica HOM05D011311 ORTHO05D000009 3.4e-33 145.2 111 64.0
Lju3616C0T1 Lonicera japonica HOM05D011311 ORTHO05D000009 3.7e-32 141.7 111 63.1
Lj5P369T32 Lonicera japonica HOM05D011311 ORTHO05D000009 7.0e-31 137.5 91 71.4
Lj1P505T9 Lonicera japonica HOM05D011311 ORTHO05D000009 1.1e-28 130.2 91 69.2
Lj3P609T9 Lonicera japonica HOM05D011311 ORTHO05D000009 2.5e-28 129.0 91 69.2
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 1.0e-26 123.6 100 56.0
Lj3P1011T16 Lonicera japonica HOM05D011311 ORTHO05D000009 1.3e-16 90.1 65 66.2
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 5.1e-13 78.2 107 38.3
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 6.6e-13 77.8 107 40.2
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 1.9e-12 76.3 114 35.1
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 4.3e-12 75.1 90 41.1
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 9.5e-12 73.9 107 39.3
Lj7P526T73 Lonicera japonica HOM05D011311 ORTHO05D000009 1.6e-11 73.2 43 81.4
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 3.1e-10 68.9 107 36.4
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 5.2e-10 68.2 110 34.5
FvH4_6g32751 Fragaria vesca HOM05D000030 ORTHO05D020648 8.9e-10 67.4 106 34.9
FvH4_3g32841 Fragaria vesca HOM05D000030 ORTHO05D020648 1.2e-09 67.0 101 37.6
FvH4_1g29581 Fragaria vesca HOM05D000030 ORTHO05D000031 1.5e-09 66.6 106 36.8
FvH4_1g17901 Fragaria vesca HOM05D000030 ORTHO05D000031 2.0e-09 66.2 106 36.8
FvH4_6g28381 Fragaria vesca HOM05D000030 ORTHO05D013601 2.0e-09 66.2 107 35.5
FvH4_4g10395 Fragaria vesca HOM05D000030 ORTHO05D000009 2.6e-09 65.9 107 34.6
FvH4_3g17731 Fragaria vesca HOM05D000030 ORTHO05D000031 3.4e-09 65.5 106 36.8
FvH4_4g16142 Fragaria vesca HOM05D000030 ORTHO05D000009 4.4e-09 65.1 104 34.6
RcHm_v2.0_Chr4g0391261 Rosa chinensis HOM05D000030 ORTHO05D000009 9.9e-09 63.9 98 34.7
SHI24752 Sapria himalayana HOM05D000030 ORTHO05D000009 2.9e-08 62.4 98 31.6
MELO3C031355.2 Cucumis melo HOM05D000030 ORTHO05D000031 1.9e-07 59.7 98 32.7
MELO3C033898.2 Cucumis melo HOM05D000030 ORTHO05D000031 2.4e-07 59.3 100 32.0
FvH4_6g30963 Fragaria vesca HOM05D000030 ORTHO05D013601 2.4e-07 59.3 90 38.9
MELO3C030225.2 Cucumis melo HOM05D000030 ORTHO05D000031 3.2e-07 58.9 100 32.0
Atru.chr5.1722 Acer truncatum HOM05D000030 ORTHO05D000009 4.1e-07 58.5 107 29.9
TWI34G1469 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.1e-07 57.8 107 31.8
MELO3C032787.2 Cucumis melo HOM05D000030 ORTHO05D000009 1.2e-06 57.0 98 31.6
Rhsim11G0012000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-06 56.2 102 30.4
TWI15G0053 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.1e-06 56.2 107 30.8
FvH4_5g34031 Fragaria vesca HOM05D000030 ORTHO05D000009 2.7e-06 55.8 108 32.4
Oeu040213.1 Olea europaea HOM05D000030 ORTHO05D000009 2.7e-06 55.8 94 34.0
Atru.chr6.1253 Acer truncatum HOM05D000030 ORTHO05D000009 3.5e-06 55.5 95 29.5
FvH4_1g22352 Fragaria vesca HOM05D000030 ORTHO05D000009 4.6e-06 55.1 96 30.2


User provided reference genes

Program Settings