Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 1.2e-86 323.2 171 100.0
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 5.3e-37 158.3 175 60.0
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 3.4e-36 155.6 171 60.2
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 7.6e-36 154.5 172 57.6
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 9.9e-36 154.1 149 61.7
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 9.9e-36 154.1 171 57.9
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 9.9e-36 154.1 161 56.5
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.7e-35 153.3 181 57.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.7e-35 153.3 174 57.5
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 2.9e-35 152.5 171 57.9
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 4.9e-35 151.8 124 71.0
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.1e-34 150.6 179 58.1
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 2.4e-34 149.4 138 63.0
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 3.2e-34 149.1 155 59.4
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 4.2e-34 148.7 137 67.9
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 5.4e-34 148.3 159 58.5
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 7.1e-34 147.9 115 66.1
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 9.3e-34 147.5 171 57.9
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 9.3e-34 147.5 172 54.7
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 1.2e-33 147.1 173 54.9
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.2e-33 147.1 172 57.6
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 2.1e-33 146.4 99 79.8
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 2.7e-33 146.0 99 79.8
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.5e-33 145.6 171 57.3
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 3.5e-33 145.6 171 57.3
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 3.5e-33 145.6 154 54.5
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 3.5e-33 145.6 172 54.7
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 4.6e-33 145.2 101 76.2
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 6.0e-33 144.8 180 57.2
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 1.0e-32 144.1 173 56.1
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 1.0e-32 144.1 173 54.3
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.7e-32 143.3 98 74.5
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.7e-32 143.3 98 74.5
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.0e-32 142.5 130 66.2
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 3.9e-32 142.1 138 63.0
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 6.6e-32 141.4 174 55.7
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 8.7e-32 141.0 174 52.9
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 1.1e-31 140.6 107 72.9
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.9e-31 139.8 177 57.1
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 2.5e-31 139.4 137 60.6
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.5e-31 139.4 130 65.4
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 3.3e-31 139.0 144 56.2
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 3.3e-31 139.0 97 78.4
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 4.3e-31 138.7 97 78.4
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.3e-30 137.1 173 54.9
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.6e-30 136.7 155 53.5
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 4.8e-30 135.2 98 76.5
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 4.8e-30 135.2 154 53.9
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 6.2e-30 134.8 172 54.7
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.1e-29 134.0 113 61.9
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 1.4e-29 133.7 125 64.0
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 1.8e-29 133.3 103 63.1
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 4.0e-29 132.1 175 53.7
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.0e-28 129.8 85 77.6
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 2.0e-28 129.8 106 71.7
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 2.0e-28 129.8 176 46.6
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 4.5e-28 128.6 104 70.2
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.3e-27 127.1 106 67.0
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 1.3e-27 127.1 183 51.4
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 2.9e-27 125.9 101 65.3
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 4.9e-27 125.2 107 67.3
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 4.9e-27 125.2 173 52.6
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 6.4e-27 124.8 84 67.9
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 1.1e-26 124.0 105 69.5
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 1.1e-26 124.0 173 49.7
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.1e-26 124.0 132 59.1
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 7.1e-26 121.3 158 51.3
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 9.3e-26 120.9 174 51.7
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.2e-25 120.6 154 51.9
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.6e-25 120.2 106 66.0
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.6e-25 120.2 104 67.3
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.6e-25 120.2 104 67.3
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.6e-25 120.2 104 67.3
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.6e-25 120.2 104 67.3
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.6e-25 120.2 104 67.3
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 2.1e-25 119.8 92 67.4
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 4.6e-25 118.6 104 66.3
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 4.6e-25 118.6 147 51.7
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 2.3e-24 116.3 85 62.4
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 5.1e-24 115.2 178 50.0
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 9.6e-23 110.9 108 61.1
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 1.6e-22 110.2 170 38.8
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.8e-22 109.4 100 65.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 2.8e-22 109.4 100 65.0
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 4.8e-22 108.6 93 72.0
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.1e-21 107.5 84 63.1
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.7e-19 100.1 92 66.3
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 2.2e-19 99.8 92 67.4
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.1e-18 97.4 147 48.3
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.1e-18 97.4 143 53.8
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.6e-17 93.6 57 75.4
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 3.9e-16 89.0 84 57.1
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.1e-14 83.2 121 49.6
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 3.7e-14 82.4 42 78.6
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.3e-11 73.9 59 62.7
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 2.2e-11 73.2 73 54.8
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 2.7e-09 66.2 113 44.2
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 1.0e-08 64.3 36 86.1
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 3.3e-07 59.3 107 46.7
PGR119G2080 Punica granatum HOM05D007375 ORTHO05D009293 4.3e-07 58.9 115 40.9
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 7.4e-07 58.2 31 77.4
TPR.G22173 Trifolium pratense HOM05D007375 ORTHO05D009293 2.8e-06 56.2 118 40.7


User provided reference genes

Program Settings