Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2E192T1 Lonicera japonica HOM05D000883 ORTHO05D008470 4.9e-57 224.2 108 100.0
Dinv38943 Davidia involucrata HOM05D000141 ORTHO05D001860 1.3e-28 129.8 108 58.3
CSS0003376 Camellia sinensis var. sinensis HOM05D000883 ORTHO05D008470 9.4e-24 113.6 108 53.7
Actinidia14562 Actinidia chinensis HOM05D000883 ORTHO05D008470 2.7e-23 112.1 108 52.8
CSS0021014 Camellia sinensis var. sinensis HOM05D000883 ORTHO05D008470 2.7e-23 112.1 108 53.7
Peaxi162Scf00119g00945 Petunia axillaris HOM05D000883 ORTHO05D008470 3.0e-22 108.6 104 55.8
Lsat_1_v5_gn_6_6541 Lactuca sativa HOM05D000883 ORTHO05D008470 6.7e-22 107.5 108 51.9
Actinidia02005 Actinidia chinensis HOM05D000883 ORTHO05D008470 3.3e-21 105.1 101 50.5
PGSC0003DMG400012208 Solanum tuberosum HOM05D000883 ORTHO05D008470 7.4e-21 104.0 104 51.9
CAN.G774.41 Capsicum annuum HOM05D000883 ORTHO05D008470 2.2e-20 102.4 108 49.1
Rhsim02G0231300 Rhododendron simsii HOM05D000883 ORTHO05D008470 8.2e-20 100.5 108 48.1
Sopen08g029390 Solanum pennellii HOM05D000883 ORTHO05D008470 1.1e-19 100.1 104 51.0
TAR375G0473 Trochodendron aralioides HOM05D000141 ORTHO05D001860 1.1e-19 100.1 108 49.1
vmacro11334 Vaccinium macrocarpon HOM05D000883 ORTHO05D008470 4.1e-19 98.2 88 53.4
Nitab4.5_0027915g0010 Nicotiana tabacum HOM05D000883 ORTHO05D008470 5.3e-19 97.8 101 52.5
Solyc08g081070.3 Solanum lycopersicum HOM05D000883 ORTHO05D008470 1.2e-18 96.7 104 50.0
Nitab4.5_0010968g0050 Nicotiana tabacum HOM05D000883 ORTHO05D008470 5.9e-18 94.4 101 50.5
Hma1.2p1_0896F.1_g234040 Hydrangea macrophylla HOM05D000883 ORTHO05D008470 1.7e-17 92.8 84 50.0
Nn6g33440 Nelumbo nucifera HOM05D000883 ORTHO05D008470 1.2e-15 86.7 108 40.7
Cc08_g14750 Coffea canephora HOM05D000883 ORTHO05D008470 1.6e-15 86.3 108 44.4
QL12p033060 Quercus lobata HOM05D000883 ORTHO05D008470 3.6e-15 85.1 105 46.7
Oeu009156.1 Olea europaea HOM05D000883 ORTHO05D008470 1.4e-14 83.2 99 45.5
Haze_08833 Corylus avellana HOM05D000883 ORTHO05D008470 1.8e-14 82.8 102 47.1
TAR374G0271 Trochodendron aralioides HOM05D000883 ORTHO05D008470 2.3e-14 82.4 97 44.3
HanXRQChr07g0189851 Helianthus annuus HOM05D000883 ORTHO05D008470 6.7e-14 80.9 98 43.9
DCAR_006740 Daucus carota HOM05D000883 ORTHO05D008470 1.1e-13 80.1 108 39.8
Atru.chr9.2189 Acer truncatum HOM05D000883 ORTHO05D008470 1.5e-13 79.7 98 49.0
Prupe.5G100200 Prunus persica HOM05D000883 ORTHO05D008470 1.5e-13 79.7 99 46.5
Ca_17532_v3 Cicer arietinum L. HOM05D000883 ORTHO05D008470 4.4e-13 78.2 94 46.8
Migut.A00763 Erythranthe guttata HOM05D000883 ORTHO05D008470 4.4e-13 78.2 99 44.4
Glyma.08G014700 Glycine max HOM05D000883 ORTHO05D008470 4.4e-13 78.2 102 46.1
Lalb_Chr16g0389991 Lupinus albus HOM05D000883 ORTHO05D008470 4.4e-13 78.2 103 44.7
Lj4g0009030 Lotus japonicus HOM05D000883 ORTHO05D008470 5.7e-13 77.8 85 54.1
CiPaw.11G135300 Carya illinoinensis HOM05D000883 ORTHO05D008470 7.4e-13 77.4 102 41.2
Thecc.03G278800 Theobroma cacao HOM05D000883 ORTHO05D008470 7.4e-13 77.4 93 46.2
TPR.G12783 Trifolium pratense HOM05D000883 ORTHO05D008470 7.4e-13 77.4 102 45.1
ECA233G4152 Erigeron canadensis HOM05D000883 ORTHO05D008470 1.7e-12 76.3 97 44.3
Phvul.002G289600 Phaseolus vulgaris HOM05D000883 ORTHO05D008470 2.8e-12 75.5 89 48.3
COL.COLO4_34463 Corchorus olitorius HOM05D000883 ORTHO05D008470 4.8e-12 74.7 94 47.9
MD06G1083100 Malus domestica HOM05D000883 ORTHO05D008470 4.8e-12 74.7 109 42.2
MSTRG.25608 Avicennia marina HOM05D000883 ORTHO05D008470 1.4e-11 73.2 104 40.4
Medtr8g098240 Medicago truncatula HOM05D000883 ORTHO05D008470 1.4e-11 73.2 96 42.7
GSVIVG01019754001 Vitis vinifera HOM05D000883 ORTHO05D008470 1.8e-11 72.8 56 60.7
Ciclev10019111m.g Citrus clementina HOM05D000883 ORTHO05D008470 7.0e-11 70.9 74 52.7
Duzib084G0727 Durio zibethinus HOM05D000883 ORTHO05D008470 2.6e-10 68.9 90 45.6
Glyma.05G208000 Glycine max HOM05D000883 ORTHO05D008470 2.6e-10 68.9 102 42.2
Psat7g033160 Pisum sativum HOM05D000883 ORTHO05D008470 3.5e-10 68.6 95 42.1
SGA_v2.0_scaffold173G39186 Striga asiatica HOM05D000883 ORTHO05D008470 4.5e-10 68.2 110 37.3
RcHm_v2.0_Chr7g0197691 Rosa chinensis HOM05D000883 ORTHO05D008470 7.7e-10 67.4 109 40.4
VMungo0251G1923 Vigna mungo HOM05D000883 ORTHO05D008470 1.0e-09 67.0 89 42.7
Gohir.A09G192300 Gossypium hirsutum HOM05D000883 ORTHO05D008470 2.2e-09 65.9 88 40.9
Aqoxy7G00323 Aquilegia oxysepala HOM05D000883 ORTHO05D008470 2.9e-09 65.5 92 41.3
FAN08G2773 Fragaria x ananassa HOM05D000883 ORTHO05D008470 3.8e-09 65.1 110 40.9
Gohir.D09G186500 Gossypium hirsutum HOM05D000883 ORTHO05D008470 1.1e-08 63.5 88 39.8
MBI18_g21560_MAGBIO Magnolia biondii HOM05D000883 ORTHO05D008470 1.5e-08 63.2 98 38.8
Manes.01G060700 Manihot esculenta HOM05D000883 ORTHO05D008470 1.9e-08 62.8 102 38.2
FvH4_5g02410 Fragaria vesca HOM05D000883 ORTHO05D008470 2.5e-08 62.4 101 41.6
FAN04G0265 Fragaria x ananassa HOM05D000883 ORTHO05D008470 2.5e-08 62.4 110 40.0
FAN18G1393 Fragaria x ananassa HOM05D000883 ORTHO05D008470 2.5e-08 62.4 101 41.6
Gorai.006G209300 Gossypium raimondii HOM05D000883 ORTHO05D008470 2.5e-08 62.4 88 39.8
Eucgr.E00597 Eucalyptus grandis HOM05D000883 ORTHO05D008470 4.2e-08 61.6 84 39.3
PGR042G3209 Punica granatum HOM05D000883 ORTHO05D008470 5.5e-08 61.2 81 40.7
Potri.003G127600 Populus trichocarpa HOM05D000883 ORTHO05D008470 7.2e-08 60.8 75 45.3
CANSAT21G1792 Cannabis sativa HOM05D000883 ORTHO05D008470 1.2e-07 60.1 104 38.5
Ah.12g056900 Amaranthus hybridus HOM05D000883 ORTHO05D008470 1.6e-07 59.7 77 39.0
Sabra03G0090800 Salix brachista HOM05D000883 ORTHO05D008470 1.6e-07 59.7 75 45.3
TWI15G0376 Tripterygium wilfordii HOM05D000883 ORTHO05D008470 1.6e-07 59.7 84 42.9
EL10Ac5g13062 Beta vulgaris HOM05D000883 ORTHO05D008470 2.1e-07 59.3 75 40.0
Sc01g0009570 Simmondsia chinensis HOM05D000883 ORTHO05D008470 2.1e-07 59.3 103 37.9
FAN13G0852 Fragaria x ananassa HOM05D000883 ORTHO05D008470 6.1e-07 57.8 92 43.5
AUR62010681 Chenopodium quinoa HOM05D000883 ORTHO05D008470 6.7e-06 54.3 77 39.0


User provided reference genes

Program Settings