Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-97 357.1 164 100.0
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-81 306.6 187 78.6
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-80 302.0 187 77.5
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-73 276.9 187 73.3
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-67 258.1 167 71.9
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-53 213.8 184 55.4
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.9e-52 209.5 181 54.1
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-51 205.7 181 54.1
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-50 202.2 181 53.0
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-50 200.7 138 71.0
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 8.6e-45 184.1 183 44.8
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-43 177.6 175 46.9
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-42 177.2 181 47.5
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-42 175.3 170 47.6
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-42 174.9 171 48.5
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-41 173.3 175 46.3
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-41 172.2 170 47.6
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-40 169.9 181 43.6
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-40 167.5 160 50.0
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-38 163.7 181 43.6
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-38 162.9 171 46.8
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-38 161.8 173 44.5
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-38 161.8 173 44.5
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-37 159.5 170 45.3
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-36 156.4 184 44.0
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-35 151.4 170 45.9
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-35 151.0 168 42.9
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-34 150.6 159 43.4
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-34 148.3 172 42.4
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-33 146.0 181 41.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-33 145.6 157 44.6
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-33 144.4 186 40.9
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-32 143.3 142 46.5
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-31 139.4 144 43.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-31 139.0 158 43.7
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-31 139.0 142 44.4
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-30 134.4 91 65.9
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-28 128.3 165 40.6
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-28 127.9 161 41.0
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 2.1e-27 126.3 147 42.2
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-27 125.9 156 40.4
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-27 125.2 136 44.9
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-26 124.0 86 64.0
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-26 122.1 159 39.6
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-25 118.6 133 41.4
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-24 117.1 102 52.9
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-23 111.3 95 58.9
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-22 108.2 122 42.6
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-21 106.7 125 45.6
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 1.1e-20 104.0 114 45.6
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-20 102.4 121 41.3
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-20 102.1 89 51.7
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-20 101.3 91 45.1
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-19 100.5 124 40.3
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 3.6e-19 99.0 111 46.8
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-19 99.0 91 47.3
Lj4A163G72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-18 97.4 126 39.7
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.4e-18 97.1 161 30.4
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-18 95.9 91 44.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 5.2e-18 95.1 161 29.8
Lj8A550T28 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-18 95.1 88 53.4
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-18 94.4 69 56.5
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 1.2e-17 94.0 161 29.8
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-17 93.2 135 37.8
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 2.6e-17 92.8 164 29.9
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-17 92.4 136 36.8
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-16 90.1 91 42.9
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.9e-16 88.6 140 33.6
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-16 88.6 112 41.1
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-16 88.2 84 47.6
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-16 88.2 104 46.2
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.4e-16 87.8 140 32.9
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.4e-16 87.8 140 32.9
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 1.4e-15 87.0 161 29.2
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.9e-15 86.7 163 31.9
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-15 85.9 107 36.4
Lj4C621T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-14 83.6 156 37.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.7e-14 82.8 163 31.3
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.6e-14 82.0 163 30.7
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-14 81.6 66 50.0
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 1.0e-13 80.9 137 28.5
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-13 80.9 83 44.6
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-13 80.9 137 35.8
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.0e-13 80.9 160 31.9
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.3e-13 80.5 140 30.7
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.9e-13 79.0 140 30.0
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-13 77.8 59 54.2
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 8.7e-13 77.8 160 30.6
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-12 77.4 117 36.8
Lj4C435T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-12 77.4 87 41.4
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-12 77.0 136 32.4
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-12 75.9 90 44.4
Lj3A910T42 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-12 74.7 57 57.9
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.2e-11 73.9 170 30.0
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 119 35.3
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 2.1e-11 73.2 157 29.3
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 3.6e-11 72.4 92 35.9
Lj1A609T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-11 72.0 134 31.3
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-10 70.9 156 28.2
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-10 70.5 56 53.6
Lj4A661T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-10 70.5 48 60.4
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-10 70.1 56 51.8
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 2.4e-10 69.7 156 28.2
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-10 69.7 86 45.3
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-10 69.7 57 52.6
PSO675G7301 Papaver somniferum HOM05D000176 ORTHO05D000106 5.2e-10 68.6 160 27.5
Lj4A456T44 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-10 68.2 56 51.8
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 6.9e-10 68.2 129 30.2
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-10 67.8 156 27.6
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-10 67.8 87 42.5
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-09 67.4 156 27.6
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-09 67.4 109 33.0
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-09 67.0 154 30.5
Lj1C830T3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-09 66.6 104 35.6
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.6e-09 66.2 161 29.8
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-09 65.9 57 52.6
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.4e-09 65.9 96 35.4
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.4e-09 65.5 96 34.4
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.4e-09 65.5 160 30.0
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.4e-09 65.5 160 30.0
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-09 65.1 136 29.4
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.8e-09 65.1 172 26.2
Aqoxy1G03413 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 9.9e-09 64.3 161 28.6
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.9e-09 64.3 96 34.4
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-08 63.9 121 29.8
Aqoxy2G01940 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.7e-08 63.5 132 29.5
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-08 63.5 154 29.2
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-08 62.8 154 28.6
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 3.8e-08 62.4 189 25.4
Lj2C1126T20 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-08 61.6 78 44.9
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.4e-07 60.5 173 26.0
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 48 45.8
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 3.2e-07 59.3 135 28.9
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-07 59.3 99 37.4
Lj4C452T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-07 58.9 40 62.5
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-07 58.9 51 47.1
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.2e-07 58.9 161 25.5
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-07 58.5 48 52.1
PSO017G7349 Papaver somniferum HOM05D000176 ORTHO05D000106 1.2e-06 57.4 141 31.9
EL10Ac5g11558 Beta vulgaris HOM05D000176 ORTHO05D012560 1.6e-06 57.0 129 34.9
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-06 57.0 43 58.1
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-06 55.5 132 28.0
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-06 55.5 96 34.4
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-06 55.5 148 27.7


User provided reference genes

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