Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 2.9e-100 368.6 195 100.0
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 1.8e-89 332.8 179 100.0
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 3.8e-84 315.1 179 92.7
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 3.2e-83 312.0 180 91.7
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 2.7e-82 308.9 176 90.9
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 3.6e-82 308.5 179 89.9
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 4.7e-82 308.1 175 92.6
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 6.1e-82 307.8 179 88.8
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 1.8e-81 306.2 179 91.6
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.8e-81 306.2 180 89.4
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 1.8e-81 306.2 179 91.1
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 4.0e-81 305.1 179 90.5
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 6.8e-81 304.3 179 90.5
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 1.2e-80 303.5 179 89.9
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 3.4e-80 302.0 182 88.5
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 5.7e-80 301.2 176 92.0
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 5.7e-80 301.2 179 87.2
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 5.7e-80 301.2 179 89.4
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 7.5e-80 300.8 179 89.9
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.8e-80 300.4 179 88.3
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.8e-80 300.4 179 88.3
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 9.8e-80 300.4 181 90.1
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 9.8e-80 300.4 179 87.7
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 9.8e-80 300.4 179 90.5
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 1.7e-79 299.7 179 89.9
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 1.7e-79 299.7 179 88.8
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 2.2e-79 299.3 184 86.4
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.2e-79 299.3 179 88.3
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.2e-79 299.3 179 88.3
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 2.2e-79 299.3 179 89.9
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 2.2e-79 299.3 179 89.9
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 2.2e-79 299.3 179 89.9
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 2.8e-79 298.9 179 88.8
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 3.7e-79 298.5 180 90.0
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 4.8e-79 298.1 180 89.4
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 6.3e-79 297.7 176 88.1
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 6.3e-79 297.7 179 87.2
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 8.3e-79 297.4 181 88.4
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 1.1e-78 297.0 179 88.8
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 1.1e-78 297.0 175 88.0
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.1e-78 297.0 185 86.5
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.1e-78 297.0 179 86.6
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 1.8e-78 296.2 179 89.4
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.8e-78 296.2 182 87.4
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 3.1e-78 295.4 179 88.3
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 5.4e-78 294.7 184 88.6
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 5.4e-78 294.7 181 87.3
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 5.4e-78 294.7 179 88.8
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 7.0e-78 294.3 183 88.5
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 7.0e-78 294.3 180 87.2
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 9.1e-78 293.9 179 86.6
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 9.1e-78 293.9 179 87.2
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 9.1e-78 293.9 182 85.2
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 1.6e-77 293.1 183 86.3
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 1.6e-77 293.1 181 87.8
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 2.0e-77 292.7 179 86.6
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 2.7e-77 292.4 181 86.2
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 2.7e-77 292.4 181 86.2
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 2.7e-77 292.4 180 87.8
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 3.5e-77 292.0 181 85.6
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 4.5e-77 291.6 179 85.5
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 4.5e-77 291.6 175 88.0
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 5.9e-77 291.2 180 86.7
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 7.7e-77 290.8 179 84.4
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 7.7e-77 290.8 182 86.8
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 1.3e-76 290.0 179 86.0
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.3e-76 290.0 181 88.4
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 2.3e-76 289.3 179 87.2
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.3e-76 289.3 179 86.0
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 3.8e-76 288.5 179 87.2
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 3.8e-76 288.5 179 85.5
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 5.0e-76 288.1 179 86.6
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 8.6e-76 287.3 179 86.6
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 8.6e-76 287.3 181 86.7
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 8.6e-76 287.3 179 85.5
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 8.6e-76 287.3 181 87.3
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 8.6e-76 287.3 173 87.3
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 1.1e-75 287.0 181 85.6
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 1.1e-75 287.0 179 86.6
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 1.1e-75 287.0 179 84.9
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.1e-75 287.0 178 86.5
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 1.5e-75 286.6 179 85.5
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 1.5e-75 286.6 179 85.5
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 1.5e-75 286.6 179 86.0
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.5e-75 286.6 179 85.5
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.9e-75 286.2 171 88.3
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 1.9e-75 286.2 176 84.1
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 1.9e-75 286.2 179 86.0
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.5e-75 285.8 206 76.2
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 3.2e-75 285.4 179 86.0
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 3.2e-75 285.4 178 84.8
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 3.2e-75 285.4 181 85.1
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 5.5e-75 284.6 168 90.5
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 5.5e-75 284.6 179 85.5
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 9.5e-75 283.9 181 85.6
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 9.5e-75 283.9 179 81.0
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 1.2e-74 283.5 179 86.0
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 1.6e-74 283.1 179 84.4
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 1.6e-74 283.1 179 84.4
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 2.8e-74 282.3 179 85.5
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 2.8e-74 282.3 179 84.9
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.8e-74 282.3 179 83.2
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 2.8e-74 282.3 180 86.1
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 3.6e-74 282.0 179 85.5
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 3.6e-74 282.0 179 85.5
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 3.6e-74 282.0 179 85.5
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 3.6e-74 282.0 179 82.7
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 4.7e-74 281.6 179 84.9
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 4.7e-74 281.6 184 85.3
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 8.0e-74 280.8 179 84.9
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 1.4e-73 280.0 179 86.0
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 6.8e-73 277.7 185 79.5
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 3.7e-71 271.9 156 91.0
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 3.7e-71 271.9 177 79.1
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 4.9e-71 271.6 171 81.3
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 6.3e-71 271.2 177 80.2
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 7.0e-70 267.7 180 82.2
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 1.6e-69 266.5 161 87.6
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.0e-68 263.8 178 77.5
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.4e-65 253.4 175 74.3
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 2.4e-62 242.7 141 90.8
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 5.4e-62 241.5 183 74.3
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 4.3e-59 231.9 159 77.4
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 4.7e-58 228.4 171 72.5
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 5.4e-54 214.9 124 90.3
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.3e-52 210.3 164 70.1
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 1.5e-51 206.8 176 67.0
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 8.3e-47 191.0 109 93.6
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.4e-46 188.3 111 90.1
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 2.7e-45 186.0 108 90.7
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 4.6e-45 185.3 108 91.7
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.3e-44 183.7 108 89.8
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 8.6e-44 181.0 104 93.3
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.5e-43 180.3 109 89.0
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.9e-43 179.9 136 72.1
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 2.0e-40 169.9 99 91.9
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 2.1e-37 159.8 110 76.4
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 6.9e-33 144.8 88 87.5
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 3.9e-28 129.0 82 81.7
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 7.6e-24 114.8 79 77.2
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 7.1e-22 108.2 63 84.1
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 8.1e-18 94.7 63 76.2
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 1.1e-11 74.3 166 34.9


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