Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C795T0 Lonicera japonica HOM05D002956 ORTHO05D008031 2.4e-116 422.2 210 100.0
ECA233G6038 Erigeron canadensis HOM05D002956 ORTHO05D008031 1.9e-52 209.9 188 61.2
HanXRQChr12g0380421 Helianthus annuus HOM05D002956 ORTHO05D008031 2.1e-51 206.5 200 57.0
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 9.6e-49 197.6 182 56.0
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 6.2e-48 194.9 187 56.1
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 8.1e-48 194.5 183 54.6
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 5.3e-47 191.8 182 54.4
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 6.9e-47 191.4 181 57.5
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 6.9e-47 191.4 182 55.5
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 9.0e-47 191.0 183 54.1
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 2.9e-45 186.0 182 53.3
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 4.9e-45 185.3 182 53.3
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 1.4e-44 183.7 182 52.2
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 1.4e-44 183.7 183 53.6
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 3.2e-44 182.6 182 53.3
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 3.2e-44 182.6 192 51.6
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 4.2e-44 182.2 182 53.8
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 4.2e-44 182.2 182 53.3
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 5.4e-44 181.8 182 52.7
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 7.1e-44 181.4 197 51.8
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 2.7e-43 179.5 182 53.3
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 2.7e-43 179.5 182 52.7
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 4.6e-43 178.7 182 52.7
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 7.9e-43 177.9 182 52.2
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 1.0e-42 177.6 183 51.4
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 1.3e-42 177.2 182 52.7
Solyc11g065040.2 Solanum lycopersicum HOM05D002956 ORTHO05D008031 1.3e-42 177.2 181 51.9
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 1.8e-42 176.8 182 51.6
Nitab4.5_0007012g0050 Nicotiana tabacum HOM05D002956 ORTHO05D008031 3.0e-42 176.0 180 53.9
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 3.9e-42 175.6 209 49.3
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 6.7e-42 174.9 182 52.2
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 8.7e-42 174.5 182 50.0
Peaxi162Scf00004g04220 Petunia axillaris HOM05D002956 ORTHO05D008031 1.9e-41 173.3 181 53.0
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 4.3e-41 172.2 182 51.6
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 4.3e-41 172.2 182 51.6
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 5.6e-41 171.8 182 48.4
VMungo1080G1429 Vigna mungo HOM05D002956 ORTHO05D008031 9.6e-41 171.0 183 49.2
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 1.3e-40 170.6 213 47.9
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 1.3e-40 170.6 182 48.9
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 2.1e-40 169.9 183 49.2
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 6.2e-40 168.3 183 48.1
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 2.6e-38 162.9 183 49.2
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 2.6e-38 162.9 182 50.5
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 5.8e-38 161.8 182 50.0
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 1.0e-37 161.0 182 49.5
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 1.7e-37 160.2 182 47.3
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 2.2e-37 159.8 183 45.9
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 2.9e-37 159.5 199 46.2
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 2.9e-37 159.5 182 46.7
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 4.9e-37 158.7 182 46.7
Cpa.g.sc34.183 Carica papaya HOM05D002956 ORTHO05D008031 6.5e-37 158.3 182 48.9
COL.COLO4_07384 Corchorus olitorius HOM05D002956 ORTHO05D008031 1.4e-36 157.1 175 49.7
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 1.9e-36 156.8 178 48.3
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 1.9e-36 156.8 183 45.4
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 4.6e-35 152.1 158 54.4
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 6.0e-35 151.8 183 47.0
unitig_22.g6189 Utricularia gibba HOM05D002956 ORTHO05D008031 6.0e-35 151.8 180 45.6
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 1.0e-34 151.0 182 47.8
PGSC0003DMG400031243 Solanum tuberosum HOM05D002956 ORTHO05D008031 3.9e-34 149.1 181 45.9
vmacro04047 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 1.5e-33 147.1 157 52.9
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 2.4e-31 139.8 184 45.1
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 6.9e-31 138.3 221 43.0
Ca_25980_v3 Cicer arietinum L. HOM05D002956 ORTHO05D008031 5.8e-30 135.2 183 42.1
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 5.8e-30 135.2 210 40.0
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 3.2e-28 129.4 313 33.2
Thecc.09G246000 Theobroma cacao HOM05D002956 ORTHO05D008031 4.2e-28 129.0 82 72.0
TAR369G0726 Trochodendron aralioides HOM05D002956 ORTHO05D008031 5.5e-28 128.6 82 74.4
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 9.3e-28 127.9 143 49.7
SGA_v2.0_scaffold26G11398 Striga asiatica HOM05D002956 ORTHO05D008031 9.3e-28 127.9 181 44.2
GSVIVG01037341001 Vitis vinifera HOM05D002956 ORTHO05D008031 9.3e-28 127.9 82 75.6
Sc06g0004740 Simmondsia chinensis HOM05D002956 ORTHO05D008031 2.7e-27 126.3 82 73.2
Gorai.001G135400 Gossypium raimondii HOM05D002956 ORTHO05D008031 2.3e-26 123.2 84 69.0
MD00G1134600 Malus domestica HOM05D002956 ORTHO05D008031 3.9e-26 122.5 80 68.8
Carub.0004s0727 Capsella rubella HOM05D002956 ORTHO05D008031 5.7e-25 118.6 84 65.5
Medtr3g045720 Medicago truncatula HOM05D002956 ORTHO05D008031 5.7e-25 118.6 83 67.5
Psat5g191880 Pisum sativum HOM05D002956 ORTHO05D008031 5.7e-25 118.6 183 39.3
FAN11G2127 Fragaria x ananassa HOM05D002956 ORTHO05D008031 7.4e-25 118.2 83 68.7
MSTRG.12436 Avicennia marina HOM05D002956 ORTHO05D008031 9.7e-25 117.9 93 63.4
Sopen11g024800 Solanum pennellii HOM05D002956 ORTHO05D008031 1.6e-24 117.1 92 62.0
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 4.8e-24 115.5 158 44.3
AT2G26810 Arabidopsis thaliana HOM05D002956 ORTHO05D008031 1.4e-23 114.0 82 63.4
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 3.1e-23 112.8 182 39.0
AUR62000217 Chenopodium quinoa HOM05D002956 ORTHO05D008031 3.1e-23 112.8 189 38.1
Oeu061696.1 Olea europaea HOM05D002956 ORTHO05D008031 5.3e-23 112.1 84 67.9
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 1.5e-22 110.5 144 44.4
Nitab4.5_0004018g0060 Nicotiana tabacum HOM05D002956 ORTHO05D008031 1.3e-21 107.5 156 42.3
FAN25G3179 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.9e-21 106.3 180 40.6
EL10Ac4g10091 Beta vulgaris HOM05D002956 ORTHO05D008031 2.5e-20 103.2 82 61.0
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 9.4e-20 101.3 185 34.1
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 2.7e-19 99.8 183 33.9
AagrBONN_evm.TU.Sc2ySwM_228.3973 Anthoceros agrestis HOM05D002956 ORTHO05D008031 1.1e-17 94.4 81 50.6
CAN.G1049.9 Capsicum annuum HOM05D002956 ORTHO05D008031 9.7e-17 91.3 87 55.2
Zm00001eb110260 Zea mays HOM05D002956 ORTHO05D008031 1.7e-16 90.5 72 63.9
GSVIVG01037340001 Vitis vinifera HOM05D002956 ORTHO05D008031 2.8e-16 89.7 61 70.5
CsaV3_6G038830 Cucumis sativus L. HOM05D002956 ORTHO05D008031 3.7e-16 89.4 63 65.1
FAN25G0087 Fragaria x ananassa HOM05D002956 ORTHO05D008031 8.2e-16 88.2 195 36.9
Zm00001eb329010 Zea mays HOM05D002956 ORTHO05D008031 1.1e-15 87.8 59 71.2
Carub.0004s0726 Capsella rubella HOM05D002956 ORTHO05D008031 2.6e-14 83.2 62 61.3
AUR62006562 Chenopodium quinoa HOM05D002956 ORTHO05D008031 1.3e-13 80.9 184 34.2
Psat2g099480 Pisum sativum HOM05D002956 ORTHO05D008031 3.8e-13 79.3 63 58.7
Psat2g099560 Pisum sativum HOM05D001082 ORTHO05D001538 3.8e-13 79.3 63 58.7
Psat5g130120 Pisum sativum HOM05D001082 ORTHO05D001538 1.4e-12 77.4 58 62.1
CAN.G468.2 Capsicum annuum HOM05D002956 ORTHO05D008031 1.9e-12 77.0 68 58.8
MELO3C020642.2 Cucumis melo HOM05D002956 ORTHO05D008031 4.7e-11 72.4 55 60.0
Psat4g060320 Pisum sativum HOM05D002956 ORTHO05D008031 7.9e-11 71.6 56 58.9
Ah.06g194770 Amaranthus hybridus HOM05D002956 ORTHO05D008031 1.0e-10 71.2 56 64.3
SMO270G0089 Selaginella moellendorffii HOM05D055329 ORTHO05D008031 1.1e-09 67.8 142 35.9
Peaxi162Scf00080g00812 Petunia axillaris HOM05D002956 ORTHO05D008031 2.4e-07 60.1 135 32.6
TPR.G13113 Trifolium pratense HOM05D001920 ORTHO05D004895 5.3e-07 58.9 78 35.9
Psat6g021640 Pisum sativum HOM05D001920 ORTHO05D004895 9.1e-07 58.2 78 34.6
DCAR_004400 Daucus carota HOM05D001920 ORTHO05D004895 4.5e-06 55.8 78 30.8
Lj5g0021243 Lotus japonicus HOM05D001920 ORTHO05D004895 7.7e-06 55.1 78 33.3
MD00G1134700 Malus domestica HOM05D002956 ORTHO05D008031 7.7e-06 55.1 38 65.8


User provided reference genes

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