Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C714T4 Lonicera japonica HOM05D006265 ORTHO05D007822 2.6e-264 914.8 472 100.0
Lj2C715T2 Lonicera japonica HOM05D006265 ORTHO05D007822 4.1e-108 396.0 543 51.7
DCAR_001991 Daucus carota HOM05D006265 ORTHO05D007822 1.8e-23 114.8 580 30.9
Actinidia39362 Actinidia chinensis HOM05D006265 ORTHO05D007822 3.1e-23 114.0 619 30.0
PGSC0003DMG400032140 Solanum tuberosum HOM05D006265 ORTHO05D007822 3.8e-21 107.1 401 35.7
Nitab4.5_0011368g0010 Nicotiana tabacum HOM05D006265 ORTHO05D007822 8.5e-21 105.9 435 31.7
Peaxi162Scf00100g00717 Petunia axillaris HOM05D006265 ORTHO05D007822 1.9e-20 104.8 576 29.2
Cc01_g01630 Coffea canephora HOM05D006265 ORTHO05D007822 8.0e-19 99.4 581 28.7
Sopen01g002020 Solanum pennellii HOM05D006265 ORTHO05D007822 8.0e-19 99.4 583 31.2
Solyc01g006010.3 Solanum lycopersicum HOM05D006265 ORTHO05D007822 1.8e-18 98.2 585 30.9
Oeu023936.1 Olea europaea HOM05D006265 ORTHO05D007822 1.2e-17 95.5 530 31.3
MSTRG.18861 Avicennia marina HOM05D006265 ORTHO05D007822 4.4e-17 93.6 612 27.8
Ciclev10014343m.g Citrus clementina HOM05D006265 ORTHO05D007822 2.2e-16 91.3 444 30.6
Oeu029371.1 Olea europaea HOM05D006265 ORTHO05D007822 1.4e-15 88.6 527 28.8
Thecc.09G212900 Theobroma cacao HOM05D006265 ORTHO05D007822 1.8e-15 88.2 257 35.4
Duzib168G1214 Durio zibethinus HOM05D006265 ORTHO05D007822 3.1e-15 87.4 269 35.3
Sc16g0012050 Simmondsia chinensis HOM05D006265 ORTHO05D007822 3.1e-15 87.4 286 38.1
Lsat_1_v5_gn_6_52400 Lactuca sativa HOM05D006265 ORTHO05D007822 4.1e-15 87.0 169 42.0
Atru.chr3.2260 Acer truncatum HOM05D006265 ORTHO05D007822 1.2e-14 85.5 390 33.1
Atru.chr3.2266 Acer truncatum HOM05D006265 ORTHO05D007822 1.2e-14 85.5 390 33.1
Haze_22984 Corylus avellana HOM05D006265 ORTHO05D007822 2.7e-14 84.3 437 31.8
Dinv09750 Davidia involucrata HOM05D006265 ORTHO05D007822 1.7e-13 81.6 392 32.4
ECA233G5869 Erigeron canadensis HOM05D006265 ORTHO05D007822 1.7e-13 81.6 526 29.5
MD03G1009900 Malus domestica HOM05D006265 ORTHO05D007822 3.8e-13 80.5 500 30.6
COL.COLO4_34991 Corchorus olitorius HOM05D006265 ORTHO05D007822 1.9e-12 78.2 467 30.8
Rhsim13G0230200 Rhododendron simsii HOM05D006265 ORTHO05D007822 1.9e-12 78.2 543 30.9
GSVIVG01025406001 Vitis vinifera HOM05D006265 ORTHO05D007822 2.5e-12 77.8 402 31.3
HanXRQChr02g0056581 Helianthus annuus HOM05D006265 ORTHO05D007822 4.2e-12 77.0 503 28.6
Potri.003G216800 Populus trichocarpa HOM05D006265 ORTHO05D007822 2.1e-11 74.7 558 30.5
Gohir.A08G011700 Gossypium hirsutum HOM05D006265 ORTHO05D007822 6.1e-11 73.2 255 34.1
CSS0049900 Camellia sinensis var. sinensis HOM05D006265 ORTHO05D007822 1.8e-10 71.6 645 26.7
QL01p007989 Quercus lobata HOM05D006265 ORTHO05D007822 6.8e-10 69.7 436 29.4
SalBow6G4223 Salvia bowleyana HOM05D006265 ORTHO05D007822 2.6e-09 67.8 569 27.9
Cfa009611 Carpinus fangiana HOM05D006265 ORTHO05D007822 3.4e-09 67.4 409 31.1
Manes.15G105700 Manihot esculenta HOM05D006265 ORTHO05D007822 9.8e-09 65.9 378 31.2
Gohir.D08G022200 Gossypium hirsutum HOM05D006265 ORTHO05D007822 1.3e-08 65.5 570 27.9
vmacro22565 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 2.2e-08 64.7 516 29.1
AUR62000024 Chenopodium quinoa HOM05D006265 ORTHO05D007822 3.7e-08 63.9 370 29.5
Hund21646 Selenicereus undatus HOM05D006265 ORTHO05D007822 3.7e-08 63.9 561 26.9
Gorai.004G017500 Gossypium raimondii HOM05D006265 ORTHO05D007822 1.8e-07 61.6 433 30.3
Nn2g15777 Nelumbo nucifera HOM05D006265 ORTHO05D007822 1.2e-06 58.9 374 29.1
Aqoxy1G00067 Aquilegia oxysepala HOM05D006265 ORTHO05D007822 7.8e-06 56.2 399 29.3


User provided reference genes

Program Settings