Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C552G1 Lonicera japonica HOM05D005306 ORTHO05D006158 3.8e-120 434.9 223 100.0
Dinv21926 Davidia involucrata HOM05D005306 ORTHO05D006158 2.4e-29 133.3 226 44.2
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 1.1e-23 114.4 212 40.6
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 5.6e-23 112.1 121 53.7
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 1.6e-22 110.5 207 38.2
Atru.chr4.126 Acer truncatum HOM05D005306 ORTHO05D006158 3.6e-22 109.4 200 37.0
CiPaw.04G097600 Carya illinoinensis HOM05D005306 ORTHO05D006158 4.0e-21 105.9 214 40.7
QL04p017893 Quercus lobata HOM05D005306 ORTHO05D006158 6.9e-21 105.1 209 38.3
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 9.0e-21 104.8 212 40.1
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 1.5e-20 104.0 224 41.1
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 3.8e-19 99.4 212 36.8
CiPaw.03G140300 Carya illinoinensis HOM05D005306 ORTHO05D006158 8.4e-19 98.2 216 38.0
QL06p049976 Quercus lobata HOM05D005306 ORTHO05D006158 5.5e-18 95.5 209 34.9
Haze_24956 Corylus avellana HOM05D005306 ORTHO05D006158 9.3e-18 94.7 211 36.5
Cfa002685 Carpinus fangiana HOM05D005306 ORTHO05D006158 2.3e-16 90.1 206 35.9
Cc07_g15400 Coffea canephora HOM05D005306 ORTHO05D006158 1.8e-13 80.5 202 34.7
TWI77G0207 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.1e-13 79.7 219 32.4
Potri.007G090500 Populus trichocarpa HOM05D005306 ORTHO05D006158 9.0e-13 78.2 211 35.5
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 1.5e-12 77.4 222 34.2
Prupe.6G182000 Prunus persica HOM05D005306 ORTHO05D006158 2.0e-12 77.0 214 33.2
TWI53G1353 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 2.6e-12 76.6 218 34.4
Sabra07G0074200 Salix brachista HOM05D005306 ORTHO05D006158 1.3e-11 74.3 211 35.1
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 3.8e-11 72.8 233 30.9
MD15G1327000 Malus domestica HOM05D005306 ORTHO05D006158 6.5e-11 72.0 213 32.4
Oeu032161.1 Olea europaea HOM05D005306 ORTHO05D006158 1.9e-10 70.5 117 41.9
Oeu032163.1 Olea europaea HOM05D005306 ORTHO05D006158 1.9e-10 70.5 117 41.9
CsaV3_6G045590 Cucumis sativus L. HOM05D005306 ORTHO05D006158 1.2e-09 67.8 181 28.7
Duzib147G0288 Durio zibethinus HOM05D005306 ORTHO05D006158 1.2e-09 67.8 65 53.8
Potri.005G077400 Populus trichocarpa HOM05D005306 ORTHO05D006158 1.2e-09 67.8 206 33.0
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 2.1e-09 67.0 210 31.0
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 2.7e-09 66.6 180 27.8
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 3.5e-09 66.2 198 30.8
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 4.6e-09 65.9 68 60.3
MD01G1027000 Malus domestica HOM05D005306 ORTHO05D006158 6.0e-09 65.5 215 31.2
TWI74G0266 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 1.8e-08 63.9 118 39.8
Eucgr.H04811 Eucalyptus grandis HOM05D005306 ORTHO05D006158 3.0e-08 63.2 219 29.2
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 8.7e-08 61.6 226 31.0
Thecc.01G104400 Theobroma cacao HOM05D005306 ORTHO05D006158 1.1e-07 61.2 204 29.9
COL.COLO4_09939 Corchorus olitorius HOM05D005306 ORTHO05D006158 1.5e-07 60.8 88 43.2
Hund13638 Selenicereus undatus HOM05D005306 ORTHO05D006158 3.3e-07 59.7 226 26.1
EL10Ac6g15084 Beta vulgaris HOM05D005306 ORTHO05D006158 5.7e-07 58.9 209 29.7
ClCG01G018910 Citrullus lanatus HOM05D005306 ORTHO05D006158 5.7e-07 58.9 181 27.6
HanXRQChr15g0484181 Helianthus annuus HOM05D005306 ORTHO05D006158 7.4e-07 58.5 134 37.3
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 1.6e-06 57.4 86 41.9
Gohir.A11G052900 Gossypium hirsutum HOM05D005306 ORTHO05D006158 2.8e-06 56.6 65 47.7
Gohir.D11G056300 Gossypium hirsutum HOM05D005306 ORTHO05D006158 2.8e-06 56.6 65 47.7
Gorai.007G061500 Gossypium raimondii HOM05D005306 ORTHO05D006158 2.8e-06 56.6 65 47.7
FvH4_1g21240 Fragaria vesca HOM05D005306 ORTHO05D006158 4.8e-06 55.8 200 30.0
Lsat_1_v5_gn_5_43440 Lactuca sativa HOM05D005306 ORTHO05D006158 4.8e-06 55.8 203 30.5
Peaxi162Scf00422g00025 Petunia axillaris HOM05D005306 ORTHO05D006158 4.8e-06 55.8 90 38.9
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 6.3e-06 55.5 200 30.5
RcHm_v2.0_Chr2g0115081 Rosa chinensis HOM05D005306 ORTHO05D006158 8.2e-06 55.1 200 30.0


User provided reference genes

Program Settings