Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 8.6e-254 879.8 428 100.0
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.0e-138 496.5 424 61.1
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 5.2e-134 481.9 437 57.0
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.1e-131 474.2 449 56.1
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 7.8e-130 468.0 434 56.2
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.7e-129 466.8 463 54.9
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 6.6e-129 464.9 446 54.0
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.6e-122 442.2 463 52.7
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.0e-121 441.0 451 51.2
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.9e-121 439.1 451 50.8
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 5.0e-121 438.7 454 52.6
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 5.0e-121 438.7 448 53.8
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.3e-120 436.0 435 54.5
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 4.3e-120 435.6 437 51.0
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.8e-119 433.0 437 50.8
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 6.2e-119 431.8 433 52.2
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.3e-118 429.9 444 52.3
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.5e-117 427.2 448 51.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 4.4e-117 425.6 474 48.9
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 7.0e-115 418.3 455 49.0
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.6e-114 417.2 452 50.2
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 7.8e-114 414.8 435 50.3
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 3.9e-113 412.5 435 50.8
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 6.6e-113 411.8 435 52.6
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 4.3e-112 409.1 439 50.3
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 5.6e-112 408.7 445 49.7
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 7.3e-112 408.3 427 49.2
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.7e-111 405.6 436 49.3
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 4.7e-111 405.6 432 50.0
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.1e-110 402.9 442 49.3
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.1e-110 402.9 434 48.8
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.0e-110 402.5 436 49.1
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 5.2e-110 402.1 451 48.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 8.9e-110 401.4 436 48.9
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.0e-109 400.2 428 47.9
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.9e-108 396.4 453 47.0
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.9e-108 396.4 429 47.6
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.4e-108 395.2 439 47.6
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 3.2e-107 392.9 439 48.3
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.2e-107 392.9 445 47.2
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 5.4e-107 392.1 429 46.9
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 7.1e-107 391.7 431 48.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.1e-106 390.2 465 46.2
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 3.5e-106 389.4 419 50.4
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.0e-105 387.9 410 48.5
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.3e-105 387.5 448 49.6
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 3.0e-105 386.3 396 50.5
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 6.6e-105 385.2 428 47.7
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 8.6e-105 384.8 432 49.1
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 3.3e-104 382.9 432 48.1
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 2.6e-101 373.2 448 45.8
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 3.4e-101 372.9 391 51.4
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.3e-100 370.9 465 44.3
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 2.9e-100 369.8 416 47.8
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.9e-100 369.8 431 46.9
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.1e-99 367.9 405 49.4
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 1.9e-99 367.1 444 45.5
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 4.2e-99 365.9 437 46.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 5.4e-99 365.5 448 46.0
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.2e-98 364.4 432 46.5
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.7e-98 363.2 437 46.7
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 3.5e-98 362.8 366 53.0
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.3e-97 360.9 447 46.8
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 5.1e-97 359.0 443 44.7
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 6.6e-97 358.6 457 44.4
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.9e-96 357.1 437 46.0
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.5e-96 356.7 455 45.3
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 3.3e-96 356.3 453 45.7
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 7.3e-96 355.1 456 44.7
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 3.6e-95 352.8 471 43.3
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.8e-95 352.4 435 45.5
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.8e-94 350.5 435 46.2
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.1e-94 349.7 450 44.9
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.5e-93 347.4 465 43.4
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.5e-93 347.4 394 46.7
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.0e-93 347.1 442 44.6
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.9e-92 343.2 430 44.2
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 1.4e-91 340.9 429 45.0
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.6e-90 337.4 432 46.3
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 3.5e-90 336.3 442 44.1
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.3e-89 333.6 456 43.0
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.9e-89 332.8 428 45.1
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 5.1e-89 332.4 428 45.8
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 7.3e-88 328.6 433 45.0
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 7.3e-88 328.6 428 42.8
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 6.2e-87 325.5 431 44.5
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 8.1e-87 325.1 431 44.1
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.4e-86 324.3 431 44.1
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.8e-86 323.9 431 44.1
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 2.4e-86 323.6 431 43.4
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 3.1e-86 323.2 428 42.5
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 3.1e-86 323.2 428 42.5
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 4.0e-86 322.8 436 42.7
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 6.9e-86 322.0 436 42.7
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 4.5e-85 319.3 429 43.4
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 5.8e-85 318.9 436 42.9
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.8e-73 280.8 446 42.4
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 3.0e-73 280.0 462 37.4
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 7.7e-61 238.8 245 49.4
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 4.2e-59 233.0 186 59.7
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.5e-48 198.0 134 70.1
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 5.9e-45 186.0 487 26.9
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-43 181.8 143 65.0
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.7e-39 166.8 130 64.6
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 4.2e-35 153.3 141 56.7
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 3.6e-34 150.2 484 26.7
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 2.3e-33 147.5 105 64.8
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 4.1e-30 136.7 435 24.6
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 1.6e-29 134.8 397 29.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.7e-28 131.3 374 27.5
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 8.0e-26 122.5 112 52.7
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 4.9e-23 113.2 339 27.4
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.4e-14 85.1 74 56.8
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 9.5e-11 72.4 75 50.7
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.1e-09 67.4 60 50.0
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 3.4e-08 63.9 43 69.8
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 1.1e-06 58.9 82 37.8


User provided reference genes

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