Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C419T7 Lonicera japonica HOM05D003229 ORTHO05D003835 3.9e-65 251.5 146 100.0
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 1.2e-08 63.9 98 38.8
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 2.0e-08 63.2 30 76.7
Potri.016G063800 Populus trichocarpa HOM05D003229 ORTHO05D003835 4.4e-08 62.0 91 35.2
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 9.7e-08 60.8 31 67.7
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 1.7e-07 60.1 132 31.8
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 1.7e-07 60.1 31 67.7
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 2.8e-07 59.3 30 70.0
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 2.8e-07 59.3 91 35.2
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 3.7e-07 58.9 29 69.0
TPR.G15596 Trifolium pratense HOM05D003229 ORTHO05D003835 3.7e-07 58.9 29 72.4
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 4.8e-07 58.5 92 30.4
Psat5g107520 Pisum sativum HOM05D003229 ORTHO05D003835 4.8e-07 58.5 29 72.4
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 6.3e-07 58.2 92 34.8
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 6.3e-07 58.2 29 72.4
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 6.3e-07 58.2 30 73.3
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 6.3e-07 58.2 29 72.4
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 8.2e-07 57.8 93 46.2
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 8.2e-07 57.8 31 67.7
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 1.1e-06 57.4 30 70.0
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-06 57.4 31 64.5
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 1.1e-06 57.4 29 75.9
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 1.1e-06 57.4 29 75.9
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 1.1e-06 57.4 112 32.1
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 1.4e-06 57.0 29 69.0
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 1.4e-06 57.0 127 31.5
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 1.4e-06 57.0 29 72.4
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 1.4e-06 57.0 29 72.4
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 1.4e-06 57.0 31 61.3
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 1.8e-06 56.6 117 33.3
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 1.8e-06 56.6 117 33.3
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 1.8e-06 56.6 107 35.5
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 2.4e-06 56.2 29 72.4
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 2.4e-06 56.2 30 70.0
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 3.1e-06 55.8 92 31.5
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 3.1e-06 55.8 29 69.0
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 3.1e-06 55.8 68 42.6
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 4.1e-06 55.5 30 66.7
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 4.1e-06 55.5 31 61.3
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 4.1e-06 55.5 31 58.1
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 5.3e-06 55.1 92 31.5
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 5.3e-06 55.1 29 69.0
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 5.3e-06 55.1 29 69.0
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 5.3e-06 55.1 29 65.5
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 5.3e-06 55.1 29 65.5
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 7.0e-06 54.7 92 32.6
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 7.0e-06 54.7 92 32.6
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 7.0e-06 54.7 92 29.3
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 7.0e-06 54.7 125 33.6
ECA240G3284 Erigeron canadensis HOM05D003229 ORTHO05D003835 7.0e-06 54.7 31 64.5
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 7.0e-06 54.7 30 66.7
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 7.0e-06 54.7 72 40.3
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 7.0e-06 54.7 30 70.0
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 7.0e-06 54.7 31 64.5
Hund15039 Selenicereus undatus HOM05D003229 ORTHO05D003835 7.0e-06 54.7 29 69.0
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 9.1e-06 54.3 29 69.0
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 9.1e-06 54.3 92 30.4
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 9.1e-06 54.3 31 64.5
Gorai.009G396300 Gossypium raimondii HOM05D003229 ORTHO05D003835 9.1e-06 54.3 31 64.5
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 9.1e-06 54.3 72 38.9
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 9.1e-06 54.3 92 32.6


User provided reference genes

Program Settings