Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.2e-106 389.8 192 100.0
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 1.0e-44 184.1 141 64.5
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.4e-43 180.3 144 64.6
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 1.4e-38 163.7 144 59.7
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 1.4e-38 163.7 144 59.7
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.6e-37 160.2 144 60.4
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 7.7e-37 157.9 144 59.0
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.0e-36 157.5 158 54.4
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.3e-36 157.1 145 55.9
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 1.7e-36 156.8 119 63.9
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 6.5e-36 154.8 141 56.7
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 8.5e-36 154.5 121 61.2
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.1e-35 154.1 116 66.4
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 1.1e-35 154.1 151 56.3
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 1.1e-35 154.1 116 62.9
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.5e-35 153.7 146 58.2
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.9e-35 153.3 158 53.2
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 4.2e-35 152.1 153 54.9
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 7.2e-35 151.4 147 55.1
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 9.4e-35 151.0 148 54.7
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 1.2e-34 150.6 154 51.3
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.6e-34 150.2 147 55.8
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 3.6e-34 149.1 149 52.3
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.6e-34 149.1 147 53.7
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 1.0e-33 147.5 151 53.0
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 1.4e-33 147.1 149 54.4
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 4.0e-33 145.6 121 60.3
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 6.7e-33 144.8 149 49.0
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 6.7e-33 144.8 146 52.7
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 6.7e-33 144.8 116 59.5
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 8.8e-33 144.4 146 51.4
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 1.2e-32 144.1 149 49.0
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 1.5e-32 143.7 153 50.3
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.5e-32 143.7 150 50.7
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 1.5e-32 143.7 116 59.5
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 2.0e-32 143.3 142 52.8
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 5.7e-32 141.7 155 52.3
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 7.5e-32 141.4 149 48.3
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 9.7e-32 141.0 164 48.8
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 1.3e-31 140.6 156 50.6
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.3e-31 140.6 116 57.8
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.3e-31 140.6 141 50.4
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 2.2e-31 139.8 161 53.4
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 2.2e-31 139.8 141 51.8
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.8e-31 138.7 142 51.4
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 4.8e-31 138.7 161 47.2
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 8.2e-31 137.9 150 50.7
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 8.2e-31 137.9 143 52.4
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 8.2e-31 137.9 154 48.7
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.1e-30 137.5 143 52.4
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 2.4e-30 136.3 187 42.8
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 2.4e-30 136.3 147 49.0
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 2.4e-30 136.3 150 48.0
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.1e-30 136.0 150 49.3
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 7.0e-30 134.8 142 49.3
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 9.1e-30 134.4 141 48.9
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.2e-29 134.0 149 49.7
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.6e-29 133.7 145 49.0
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 2.0e-29 133.3 150 48.7
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 3.5e-29 132.5 138 51.4
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 3.5e-29 132.5 150 48.7
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.5e-29 132.5 149 48.3
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 5.9e-29 131.7 141 47.5
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 5.9e-29 131.7 150 49.3
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 7.7e-29 131.3 151 47.7
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.0e-28 131.0 148 49.3
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 1.0e-28 131.0 149 48.3
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.3e-28 130.6 119 54.6
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.3e-28 130.6 145 46.9
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.7e-28 130.2 154 49.4
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 2.2e-28 129.8 122 53.3
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 2.2e-28 129.8 163 46.0
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 2.2e-28 129.8 156 46.8
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.2e-28 129.8 143 49.0
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.2e-28 129.8 143 49.0
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.9e-28 129.4 130 55.4
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 2.9e-28 129.4 143 46.2
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 5.0e-28 128.6 147 46.3
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 6.5e-28 128.3 145 46.9
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 6.5e-28 128.3 118 54.2
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 1.5e-27 127.1 146 49.3
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.5e-27 127.1 147 45.6
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.5e-27 127.1 147 45.6
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.9e-27 126.7 154 48.7
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 1.9e-27 126.7 150 46.7
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 3.2e-27 125.9 155 43.9
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 3.2e-27 125.9 144 48.6
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 3.2e-27 125.9 150 48.0
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 5.5e-27 125.2 157 44.6
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 9.4e-27 124.4 118 55.9
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 9.4e-27 124.4 122 53.3
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 9.4e-27 124.4 117 54.7
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 2.7e-26 122.9 141 47.5
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 2.7e-26 122.9 206 39.8
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 4.7e-26 122.1 147 44.2
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 6.1e-26 121.7 150 46.0
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 6.1e-26 121.7 123 50.4
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 6.1e-26 121.7 123 50.4
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 1.0e-25 120.9 180 40.0
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 1.0e-25 120.9 115 55.7
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 2.3e-25 119.8 147 43.5
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 3.0e-25 119.4 149 45.6
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 6.8e-25 118.2 200 36.0
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 8.8e-25 117.9 148 45.3
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 2.0e-24 116.7 141 44.0
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 2.6e-24 116.3 118 49.2
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 2.6e-24 116.3 118 49.2
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 2.6e-24 116.3 114 51.8
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 7.5e-24 114.8 136 50.0
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.7e-23 113.6 116 50.9
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 6.3e-23 111.7 161 41.6
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 1.8e-22 110.2 118 49.2
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 5.4e-22 108.6 140 43.6
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 5.4e-22 108.6 221 32.6
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 1.6e-21 107.1 110 51.8
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 5.9e-21 105.1 214 34.1
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 1.3e-20 104.0 82 57.3
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.3e-20 104.0 113 49.6
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.7e-20 103.6 83 57.8
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 1.9e-19 100.1 120 47.5
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 3.3e-19 99.4 136 42.6
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.6e-18 97.1 81 59.3
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 3.6e-18 95.9 139 41.7
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.4e-17 94.0 132 40.9
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.4e-17 94.0 132 40.9
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.4e-17 94.0 137 42.3
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 3.0e-17 92.8 120 43.3
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 3.0e-17 92.8 138 40.6
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.0e-17 92.4 117 42.7
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 4.0e-17 92.4 134 41.0
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 5.2e-17 92.0 134 41.0
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 5.2e-17 92.0 147 39.5
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 6.8e-17 91.7 139 38.8
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 8.9e-17 91.3 122 42.6
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.2e-16 90.9 138 42.0
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.5e-16 90.5 101 48.5
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 1.5e-16 90.5 128 42.2
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.5e-16 90.5 81 54.3
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 2.0e-16 90.1 146 41.1
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 7.5e-16 88.2 139 38.1
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 1.3e-15 87.4 132 40.2
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 1.3e-15 87.4 132 40.2
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 1.7e-15 87.0 145 41.4
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 5.4e-14 82.0 111 41.4
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 1.2e-13 80.9 105 41.0
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 7.8e-13 78.2 77 48.1
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 6.6e-12 75.1 75 48.0
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 7.3e-11 71.6 102 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 1.4e-09 67.4 112 38.4
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 3.1e-09 66.2 60 51.7
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 2.2e-07 60.1 98 36.7
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 2.2e-07 60.1 45 60.0
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 9.2e-06 54.7 57 49.1


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