Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C127T8 Lonicera japonica HOM05D000236 ORTHO05D001002 2.8e-39 164.9 84 100.0
Dinv19815 Davidia involucrata HOM05D000236 ORTHO05D000192 1.2e-13 79.7 82 54.9
Nitab4.5_0001922g0150 Nicotiana tabacum HOM05D000236 ORTHO05D000192 2.2e-12 75.5 82 50.0
MSTRG.5803 Avicennia marina HOM05D000236 ORTHO05D000192 3.8e-12 74.7 79 53.2
Nitab4.5_0010125g0020 Nicotiana tabacum HOM05D000236 ORTHO05D000192 3.8e-12 74.7 82 48.8
Actinidia39875 Actinidia chinensis HOM05D001169 ORTHO05D001002 4.9e-12 74.3 81 50.6
Rhsim03G0082600 Rhododendron simsii HOM05D000236 ORTHO05D000192 4.9e-12 74.3 81 50.6
PGSC0003DMG400002725 Solanum tuberosum HOM05D000236 ORTHO05D000192 4.9e-12 74.3 82 48.8
Solyc09g008940.4 Solanum lycopersicum HOM05D000236 ORTHO05D000192 3.2e-11 71.6 82 48.8
Sopen09g003710 Solanum pennellii HOM05D000236 ORTHO05D000192 3.2e-11 71.6 82 48.8
Migut.L01748 Erythranthe guttata HOM05D000236 ORTHO05D000192 4.1e-11 71.2 80 56.2
Peaxi162Scf00412g00712 Petunia axillaris HOM05D000236 ORTHO05D000192 5.4e-11 70.9 82 48.8
CAN.G824.36 Capsicum annuum HOM05D000236 ORTHO05D000192 1.2e-10 69.7 81 46.9
Oeu040551.1 Olea europaea HOM05D000236 ORTHO05D000192 3.0e-09 65.1 80 48.8
MSTRG.26657 Avicennia marina HOM05D000236 ORTHO05D000192 1.1e-08 63.2 79 50.6
Oeu023846.1 Olea europaea HOM05D000236 ORTHO05D000192 3.3e-08 61.6 84 46.4
Nn6g35078 Nelumbo nucifera HOM05D000236 ORTHO05D000192 4.3e-08 61.2 80 46.2
TAR623G0244 Trochodendron aralioides HOM05D000236 ORTHO05D000192 5.6e-08 60.8 82 45.1
vmacro07378 Vaccinium macrocarpon HOM05D000236 ORTHO05D000192 5.6e-08 60.8 80 43.8
Manes.08G019700 Manihot esculenta HOM05D000236 ORTHO05D000192 1.6e-07 59.3 80 46.2
Cc06_g05090 Coffea canephora HOM05D000236 ORTHO05D000192 3.6e-07 58.2 80 43.8
FvH4_6g17630 Fragaria vesca HOM05D000236 ORTHO05D000192 6.2e-07 57.4 85 43.5
FAN05G2343 Fragaria x ananassa HOM05D000236 ORTHO05D000192 8.1e-07 57.0 84 44.0
FAN05G2384 Fragaria x ananassa HOM05D000236 ORTHO05D000192 8.1e-07 57.0 84 44.0
QL07p040762 Quercus lobata HOM05D000236 ORTHO05D000192 8.1e-07 57.0 83 43.4
Dinv21269 Davidia involucrata HOM05D000236 ORTHO05D000192 1.4e-06 56.2 82 47.6
GSVIVG01033765001 Vitis vinifera HOM05D000236 ORTHO05D000192 4.0e-06 54.7 81 43.2
Nn2g13970 Nelumbo nucifera HOM05D000236 ORTHO05D000192 6.9e-06 53.9 80 45.0
FAN09G3237 Fragaria x ananassa HOM05D000236 ORTHO05D000192 9.0e-06 53.5 85 42.4
FAN14G5897 Fragaria x ananassa HOM05D000236 ORTHO05D000192 9.0e-06 53.5 85 42.4
Thecc.05G079700 Theobroma cacao HOM05D000236 ORTHO05D000192 9.0e-06 53.5 83 44.6


User provided reference genes

Program Settings