Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C124T14 Lonicera japonica HOM05D007206 ORTHO05D009176 5.0e-90 334.3 161 100.0
Cc06_g04800 Coffea canephora HOM05D007206 ORTHO05D009176 2.1e-56 222.6 177 61.6
ECA233G5177 Erigeron canadensis HOM05D007206 ORTHO05D009176 1.8e-55 219.5 184 58.2
Hma1.2p1_0564F.1_g179170 Hydrangea macrophylla HOM05D007206 ORTHO05D009176 2.0e-54 216.1 175 64.0
Lsat_1_v5_gn_6_28201 Lactuca sativa HOM05D007206 ORTHO05D009176 2.9e-53 212.2 183 57.9
HanXRQChr13g0400551 Helianthus annuus HOM05D007206 ORTHO05D009176 8.4e-53 210.7 166 60.2
Migut.J00478 Erythranthe guttata HOM05D007206 ORTHO05D009176 7.1e-52 207.6 167 60.5
SGA_v2.0_scaffold657G53380 Striga asiatica HOM05D007206 ORTHO05D009176 1.1e-49 200.3 164 56.1
CsaV3_3G036450 Cucumis sativus L. HOM05D007206 ORTHO05D009176 1.5e-49 199.9 163 58.3
Sopen01g017760 Solanum pennellii HOM05D007206 ORTHO05D009176 1.9e-49 199.5 158 56.3
MELO3C009409.2 Cucumis melo HOM05D007206 ORTHO05D009176 4.3e-49 198.4 163 57.7
Solyc09g008590.4 Solanum lycopersicum HOM05D007206 ORTHO05D009176 5.6e-49 198.0 158 55.7
PGSC0003DMG400012983 Solanum tuberosum HOM05D007206 ORTHO05D009176 9.6e-49 197.2 158 55.7
ClCG10G019630 Citrullus lanatus HOM05D007206 ORTHO05D009176 1.6e-48 196.4 174 55.7
Hund01087 Selenicereus undatus HOM05D007206 ORTHO05D009176 2.8e-48 195.7 155 57.4
Haze_19480 Corylus avellana HOM05D007206 ORTHO05D009176 4.8e-48 194.9 157 58.6
Actinidia32469 Actinidia chinensis HOM05D007206 ORTHO05D009176 6.2e-48 194.5 164 62.2
Oeu017000.1 Olea europaea HOM05D007206 ORTHO05D009176 6.2e-48 194.5 175 54.9
CiPaw.09G005300 Carya illinoinensis HOM05D007206 ORTHO05D009176 1.4e-47 193.4 173 57.2
DCAR_017648 Daucus carota HOM05D007206 ORTHO05D009176 1.4e-47 193.4 156 60.3
RcHm_v2.0_Chr3g0471351 Rosa chinensis HOM05D007206 ORTHO05D009176 1.4e-47 193.4 170 56.5
Sed0016601 Sechium edule HOM05D007206 ORTHO05D009176 3.1e-47 192.2 165 57.0
FAN05G5006 Fragaria x ananassa HOM05D007206 ORTHO05D009176 5.3e-47 191.4 155 59.4
SalBow3G1834 Salvia bowleyana HOM05D007206 ORTHO05D009176 5.3e-47 191.4 176 53.4
CSS0049694 Camellia sinensis var. sinensis HOM05D007206 ORTHO05D009176 2.0e-46 189.5 133 69.2
FvH4_6g17250 Fragaria vesca HOM05D007206 ORTHO05D009176 2.6e-46 189.1 155 58.7
FAN05G2314 Fragaria x ananassa HOM05D007206 ORTHO05D009176 5.8e-46 188.0 155 58.1
Prupe.7G122800 Prunus persica HOM05D007206 ORTHO05D009176 7.6e-46 187.6 179 53.6
FAN14G2195 Fragaria x ananassa HOM05D007206 ORTHO05D009176 2.2e-45 186.0 155 58.1
Glyma.19G188400 Glycine max HOM05D007206 ORTHO05D009176 3.8e-45 185.3 178 52.8
CAN.G1759.3 Capsicum annuum HOM05D007206 ORTHO05D009176 8.4e-45 184.1 144 59.0
Lj1g0012469 Lotus japonicus HOM05D007206 ORTHO05D009176 8.4e-45 184.1 175 52.6
Lalb_Chr25g0288781 Lupinus albus HOM05D007206 ORTHO05D009176 8.4e-45 184.1 178 52.8
Potri.006G119100 Populus trichocarpa HOM05D007206 ORTHO05D009176 3.2e-44 182.2 174 53.4
Glyma.03G188300 Glycine max HOM05D007206 ORTHO05D009176 5.5e-44 181.4 171 51.5
QL07p041366 Quercus lobata HOM05D007206 ORTHO05D009176 5.5e-44 181.4 162 58.0
Duzib093G2029 Durio zibethinus HOM05D007206 ORTHO05D009176 7.1e-44 181.0 178 53.9
TPR.G31671 Trifolium pratense HOM05D007206 ORTHO05D009176 7.1e-44 181.0 180 51.7
Sabra06G0093700 Salix brachista HOM05D007206 ORTHO05D009176 1.6e-43 179.9 168 52.4
Ca_08938_v3 Cicer arietinum L. HOM05D007206 ORTHO05D009176 4.6e-43 178.3 171 51.5
Ca_30111_v3 Cicer arietinum L. HOM05D007206 ORTHO05D009176 4.6e-43 178.3 171 51.5
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 7.9e-43 177.6 149 57.0
Manes.09G048990 Manihot esculenta HOM05D007206 ORTHO05D009176 1.0e-42 177.2 171 48.0
Medtr7g102770 Medicago truncatula HOM05D007206 ORTHO05D009176 2.3e-42 176.0 144 56.2
Eucgr.K02418 Eucalyptus grandis HOM05D007206 ORTHO05D009176 8.7e-42 174.1 157 53.5
MD14G1096900 Malus domestica HOM05D007206 ORTHO05D009176 2.5e-41 172.6 151 55.0
Peaxi162Scf01195g00005 Petunia axillaris HOM05D007206 ORTHO05D009176 3.3e-41 172.2 148 54.1
VMungo1383G0088 Vigna mungo HOM05D007206 ORTHO05D009176 3.3e-41 172.2 171 50.9
Thecc.05G075700 Theobroma cacao HOM05D007206 ORTHO05D009176 5.6e-41 171.4 168 51.8
Sed0006266 Sechium edule HOM05D007206 ORTHO05D009176 7.4e-41 171.0 174 48.9
TWI77G0103 Tripterygium wilfordii HOM05D007206 ORTHO05D009176 1.6e-40 169.9 170 49.4
Cpa.g.sc5.124 Carica papaya HOM05D007206 ORTHO05D009176 2.1e-40 169.5 159 50.3
COL.COLO4_22256 Corchorus olitorius HOM05D007206 ORTHO05D009176 2.8e-40 169.1 145 55.9
Dinv35836 Davidia involucrata HOM05D007206 ORTHO05D009176 3.7e-40 168.7 113 69.0
Aqoxy1G01032 Aquilegia oxysepala HOM05D007206 ORTHO05D009176 6.2e-40 167.9 161 52.8
THA.LOC104826925 Tarenaya hassleriana HOM05D007206 ORTHO05D009176 1.8e-39 166.4 159 53.5
ATR0580G453 Amborella trichopoda HOM05D007206 ORTHO05D009176 1.2e-38 163.7 170 48.8
MBI18_g24930_MAGBIO Magnolia biondii HOM05D007206 ORTHO05D009176 2.0e-38 162.9 150 54.0
Psat0s4599g0080 Pisum sativum HOM05D007206 ORTHO05D009176 2.0e-38 162.9 156 51.9
AL3G21200 Arabidopsis lyrata HOM05D007206 ORTHO05D009176 3.4e-38 162.2 132 56.8
Gohir.D01G129600 Gossypium hirsutum HOM05D007206 ORTHO05D009176 5.8e-38 161.4 159 52.8
MD12G1102700 Malus domestica HOM05D007206 ORTHO05D009176 7.6e-38 161.0 157 50.3
C03p43430 Brassica napus HOM05D007206 ORTHO05D009176 1.0e-37 160.6 133 55.6
AT3G09925 Arabidopsis thaliana HOM05D007206 ORTHO05D009176 1.3e-37 160.2 130 57.7
BcaC01g04253 Brassica carinata HOM05D007206 ORTHO05D009176 1.3e-37 160.2 132 56.1
BolC3t16614H Brassica oleracea HOM05D007206 ORTHO05D009176 1.3e-37 160.2 132 56.1
Carub.0003s0903 Capsella rubella HOM05D007206 ORTHO05D009176 1.3e-37 160.2 132 56.1
CARHR084450 Cardamine hirsuta HOM05D007206 ORTHO05D009176 1.3e-37 160.2 132 56.1
Sc02g0001330 Simmondsia chinensis HOM05D007206 ORTHO05D009176 1.3e-37 160.2 147 49.0
arahy.Tifrunner.gnm1.ann1.06CJ1U Arachis hypogaea HOM05D007206 ORTHO05D009176 1.7e-37 159.8 119 59.7
BraA03t12750Z Brassica rapa HOM05D007206 ORTHO05D009176 1.7e-37 159.8 132 56.1
Gorai.002G160400 Gossypium raimondii HOM05D007206 ORTHO05D009176 1.7e-37 159.8 173 50.3
Sp3g08280 Schrenkiella parvula HOM05D007206 ORTHO05D009176 1.7e-37 159.8 132 56.1
arahy.Tifrunner.gnm1.ann1.A01TPE Arachis hypogaea HOM05D007206 ORTHO05D009176 3.8e-37 158.7 119 59.7
PSO063G5977 Papaver somniferum HOM05D007206 ORTHO05D009176 8.4e-37 157.5 172 46.5
Atru.chr8.1702 Acer truncatum HOM05D007206 ORTHO05D009176 1.1e-36 157.1 163 48.5
Phvul.001G183600 Phaseolus vulgaris HOM05D007206 ORTHO05D009176 2.5e-36 156.0 172 45.9
Aa31LG3G2410 Aethionema arabicum HOM05D007206 ORTHO05D009176 3.2e-36 155.6 155 48.4
BcaB03g11581 Brassica carinata HOM05D007206 ORTHO05D009176 9.3e-36 154.1 132 54.5
A03p35770 Brassica napus HOM05D007206 ORTHO05D009176 1.2e-35 153.7 133 55.6
Thhalv10021649m.g Eutrema salsugineum HOM05D007206 ORTHO05D009176 1.2e-35 153.7 132 53.8
C05p58110 Brassica napus HOM05D007206 ORTHO05D009176 6.0e-35 151.4 132 53.8
BolC5t34468H Brassica oleracea HOM05D007206 ORTHO05D009176 6.0e-35 151.4 132 53.8
Ciclev10006960m.g Citrus clementina HOM05D007206 ORTHO05D009176 6.0e-35 151.4 180 48.3
A05p39080 Brassica napus HOM05D007206 ORTHO05D009176 1.8e-34 149.8 132 53.0
BraA05t22700Z Brassica rapa HOM05D007206 ORTHO05D009176 1.8e-34 149.8 132 53.0
HPP92_008498 Vanilla planifolia HOM05D007206 ORTHO05D009176 2.5e-33 146.0 141 46.1
EL10Ac9g22544 Beta vulgaris HOM05D007206 ORTHO05D009176 2.2e-32 142.9 145 48.3
AUR62043339 Chenopodium quinoa HOM05D007206 ORTHO05D009176 8.2e-32 141.0 163 41.7
AUR62022783 Chenopodium quinoa HOM05D007206 ORTHO05D009176 6.9e-31 137.9 165 41.8
CANSAT80G1624 Cannabis sativa HOM05D007206 ORTHO05D009176 1.6e-27 126.7 152 45.4
DCAR_017650 Daucus carota HOM05D007206 ORTHO05D009176 6.7e-26 121.3 151 41.7
PSO339G4243 Papaver somniferum HOM05D007206 ORTHO05D009176 4.3e-25 118.6 168 44.6
Eucgr.F02194 Eucalyptus grandis HOM05D007206 ORTHO05D009176 3.7e-24 115.5 101 54.5
PSO063G3127 Papaver somniferum HOM05D007206 ORTHO05D009176 6.3e-24 114.8 167 43.7
BcaC05g29720 Brassica carinata HOM05D007206 ORTHO05D009176 4.1e-23 112.1 119 46.2
Zm00001eb022730 Zea mays HOM05D007206 ORTHO05D009176 1.6e-19 100.1 136 41.9
Os10g0546100 Oryza sativa ssp. japonica HOM05D007206 ORTHO05D009176 2.1e-19 99.8 132 38.6
FAN09G1747 Fragaria x ananassa HOM05D007206 ORTHO05D022624 5.1e-18 95.1 66 62.1
Lalb_Chr01g0018521 Lupinus albus HOM05D007206 ORTHO05D009176 5.9e-14 81.6 55 63.6
GSVIVG01033715001 Vitis vinifera HOM05D007206 ORTHO05D009176 1.9e-12 76.6 84 53.6
GSVIVG01033719001 Vitis vinifera HOM05D007206 ORTHO05D009176 1.9e-12 76.6 84 53.6
TAR636G2944 Trochodendron aralioides HOM05D000080 ORTHO05D000053 7.4e-09 64.7 85 37.6
Os01g0164300 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 7.0e-07 58.2 137 29.9
Zm00001eb123470 Zea mays HOM05D005469 ORTHO05D001701 9.1e-07 57.8 137 29.2
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 1.2e-06 57.4 137 29.9
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 3.5e-06 55.8 121 33.1


User provided reference genes

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