Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 3.0e-60 235.0 116 100.0
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 3.7e-26 121.7 59 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.2e-24 116.7 59 96.6
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 5.9e-24 114.4 59 94.9
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 7.7e-24 114.0 59 93.2
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.0e-23 113.6 59 93.2
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 1.7e-23 112.8 59 93.2
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 1.7e-23 112.8 59 93.2
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.7e-23 112.8 59 93.2
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.9e-23 112.1 59 93.2
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 3.8e-23 111.7 59 91.5
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.8e-23 111.7 59 93.2
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 91.5
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 91.5
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 91.5
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 5.0e-23 111.3 59 93.2
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 1.1e-22 110.2 59 93.2
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.1e-22 110.2 59 93.2
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.5e-22 109.8 59 91.5
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 2.5e-22 109.0 59 91.5
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.5e-22 109.0 59 91.5
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 5.5e-22 107.8 59 89.8
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 7.2e-22 107.5 59 91.5
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 1.6e-21 106.3 59 93.2
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 3.6e-21 105.1 59 89.8
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 8.0e-21 104.0 59 88.1
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.0e-20 103.6 59 86.4
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.0e-20 103.6 59 88.1
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 2.3e-20 102.4 59 88.1
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 8.8e-20 100.5 58 86.2
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 8.8e-20 100.5 59 84.7
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.2e-19 100.1 59 88.1
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 3.4e-19 98.6 59 83.1
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 9.7e-19 97.1 52 92.3
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 2.2e-18 95.9 59 81.4
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 5.5e-14 81.3 47 89.4
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.4e-12 76.6 45 86.7
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 8.8e-12 73.9 53 75.5
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 2.6e-11 72.4 39 89.7
ATR0753G081 Amborella trichopoda HOM05D056248 ORTHO05D038349 1.1e-09 67.0 62 56.5
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 2.0e-08 62.8 47 70.2
Sed0016567 Sechium edule HOM05D009884 ORTHO05D012165 1.0e-07 60.5 32 90.6


User provided reference genes

Program Settings