Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 1.8e-307 1058.5 558 100.0
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 1.3e-196 690.3 544 72.2
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.1e-192 677.2 539 70.9
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 4.8e-172 608.6 529 65.6
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.3e-169 600.5 533 65.5
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 1.7e-169 600.1 544 63.8
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 2.5e-168 596.3 532 63.5
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 1.5e-165 587.0 536 62.3
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 9.1e-163 577.8 532 63.3
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.2e-162 577.4 538 63.4
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 1.1e-160 570.9 572 58.2
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 4.2e-160 568.9 542 60.9
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 2.1e-159 566.6 541 59.3
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 5.1e-158 562.0 525 61.3
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 5.7e-157 558.5 548 60.2
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 2.2e-156 556.6 520 59.6
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 3.7e-156 555.8 532 60.2
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 6.3e-156 555.1 526 61.0
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 8.2e-156 554.7 549 60.5
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 8.2e-156 554.7 552 60.0
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 7.0e-155 551.6 525 59.2
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.2e-154 550.8 537 58.7
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 5.9e-154 548.5 539 59.6
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 1.7e-153 547.0 651 52.7
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 2.2e-153 546.6 547 58.9
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 8.5e-153 544.7 525 58.3
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 1.1e-152 544.3 540 59.3
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 4.2e-152 542.3 537 59.4
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 9.4e-152 541.2 528 59.1
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 6.1e-151 538.5 540 58.9
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 8.0e-151 538.1 563 56.8
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 1.8e-150 537.0 532 59.0
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 3.0e-150 536.2 563 56.7
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 6.7e-150 535.0 540 58.3
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 2.8e-148 529.6 523 57.4
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 6.3e-148 528.5 590 54.1
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 1.1e-147 527.7 541 58.0
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 1.4e-147 527.3 522 58.6
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 7.0e-147 525.0 557 56.4
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.0e-146 523.5 531 57.4
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 3.5e-146 522.7 603 54.4
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 4.5e-146 522.3 602 52.5
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 5.9e-146 521.9 524 57.3
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 4.7e-143 512.3 561 55.8
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.0e-142 511.1 628 51.1
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.4e-142 510.8 539 57.1
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 1.8e-142 510.4 639 52.7
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 2.3e-142 510.0 530 57.9
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 4.4e-141 505.8 523 55.6
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 1.3e-140 504.2 600 52.0
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.3e-140 504.2 560 55.2
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 2.4e-139 500.0 523 56.2
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 5.4e-139 498.8 648 48.8
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 7.0e-139 498.4 523 55.4
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 2.7e-138 496.5 554 53.4
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 4.5e-138 495.7 604 52.5
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.0e-137 494.6 598 51.0
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 1.3e-137 494.2 572 54.5
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 1.7e-137 493.8 540 55.6
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.7e-137 493.8 524 55.3
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.9e-136 490.3 624 49.4
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 3.6e-135 486.1 536 54.5
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 1.3e-132 477.6 564 52.8
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 1.7e-132 477.2 553 53.0
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.2e-132 476.9 488 58.2
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 4.9e-132 475.7 507 56.6
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.9e-132 475.7 523 54.1
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.4e-131 473.4 380 70.3
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 3.1e-131 473.0 519 54.5
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 3.3e-128 463.0 515 53.6
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 8.0e-127 458.4 529 52.2
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 1.2e-125 454.5 568 51.1
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 2.0e-125 453.8 568 50.7
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 2.0e-125 453.8 444 58.8
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.4e-125 452.6 620 47.3
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 4.9e-124 449.1 554 50.9
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.1e-123 448.0 564 50.7
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 4.1e-123 446.0 453 58.9
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 4.1e-123 446.0 447 58.8
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 7.0e-123 445.3 466 56.4
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.6e-122 444.1 620 47.3
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 1.0e-121 441.4 479 56.6
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 1.0e-121 441.4 479 56.6
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 1.3e-121 441.0 532 52.3
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 1.3e-121 441.0 473 57.1
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.9e-121 439.5 598 48.0
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 1.5e-120 437.6 479 56.4
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 1.5e-120 437.6 479 56.4
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 9.5e-120 434.9 474 55.7
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.6e-119 434.1 556 48.2
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 3.6e-119 433.0 608 46.7
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 1.1e-115 421.4 525 50.9
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 3.2e-115 419.9 538 51.5
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 2.5e-112 410.2 453 53.6
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 3.3e-112 409.8 548 49.6
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 9.5e-112 408.3 611 45.3
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 8.1e-111 405.2 560 48.6
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 4.0e-110 402.9 533 48.8
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.6e-103 379.8 486 49.8
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.6e-98 362.8 288 68.8
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 1.5e-96 357.8 598 43.0
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 7.3e-88 328.9 330 59.7
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 7.3e-88 328.9 628 40.1
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 2.8e-87 327.0 710 36.1
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.7e-76 291.2 342 50.9
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 3.5e-74 283.5 320 50.3
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 3.3e-72 276.9 553 39.8
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 7.9e-66 255.8 202 67.3
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.7e-52 211.5 256 54.7
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.5e-48 197.6 479 34.4
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 5.7e-48 196.4 155 71.0
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 2.9e-44 184.1 290 39.3
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.9e-35 154.8 137 62.0
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 2.7e-34 151.0 233 44.6
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 7.2e-27 126.3 288 32.6
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 7.2e-27 126.3 217 34.6
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 2.2e-23 114.8 79 68.4
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 9.1e-22 109.4 87 64.4
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.5e-19 101.3 72 73.6
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.4e-16 90.5 168 42.3
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.9e-15 87.0 52 80.8
Actinidia32248 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.7e-07 62.0 57 64.9
Solyc09g074700.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 8.3e-07 59.7 60 61.7


User provided reference genes

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