Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 0.0e+00 1133.2 564 100.0
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 1.7e-148 530.4 454 59.3
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 2.1e-146 523.5 452 59.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 1.1e-144 517.7 452 58.0
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 1.3e-140 504.2 482 56.4
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 2.3e-137 493.4 458 55.7
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 3.6e-135 486.1 448 55.1
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 4.7e-135 485.7 456 53.9
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 1.5e-133 480.7 457 54.9
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 2.6e-133 479.9 457 55.4
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 3.4e-133 479.6 471 55.0
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 2.2e-132 476.9 485 54.2
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 3.8e-132 476.1 457 54.5
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 3.8e-132 476.1 438 57.1
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 3.2e-131 473.0 466 54.3
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 5.4e-131 472.2 456 52.6
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 5.4e-131 472.2 457 54.9
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 8.7e-129 464.9 457 53.6
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 1.1e-128 464.5 458 53.5
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.5e-128 464.2 457 53.2
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 1.6e-127 460.7 479 52.0
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 8.1e-127 458.4 480 52.7
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 4.0e-126 456.1 457 52.5
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 1.3e-124 451.1 458 52.2
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 6.4e-124 448.7 574 47.0
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.2e-123 446.4 444 52.0
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.2e-123 446.0 444 52.3
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 2.1e-122 443.7 452 51.5
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 2.5e-120 436.8 453 49.0
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 7.3e-120 435.3 456 48.0
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 2.8e-119 433.3 454 50.9
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-116 424.5 427 52.0
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.4e-115 420.2 431 51.0
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 9.3e-115 418.3 454 49.1
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 1.8e-113 414.1 377 59.7
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 3.0e-113 413.3 377 59.2
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 4.3e-112 409.5 497 46.1
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 4.8e-111 406.0 444 48.4
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 2.6e-109 400.2 451 47.7
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 6.4e-108 395.6 439 47.4
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 8.4e-108 395.2 494 47.4
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 9.0e-102 375.2 445 44.7
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 1.2e-101 374.8 455 44.4
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 1.9e-96 357.5 454 43.4
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.9e-96 357.5 446 43.3
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 2.5e-96 357.1 453 43.7
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 3.3e-96 356.7 452 43.1
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 1.6e-95 354.4 454 41.9
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 1.6e-95 354.4 454 41.9
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 5.9e-93 345.9 452 42.0
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.0e-92 345.1 452 41.8
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 1.4e-91 341.3 454 42.7
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 5.5e-91 339.3 401 45.9
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 7.2e-91 339.0 454 42.1
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.1e-88 331.6 477 40.9
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 3.7e-87 326.6 453 41.7
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 9.1e-86 322.0 368 47.3
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 2.9e-84 317.0 417 45.8
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 3.8e-84 316.6 325 52.3
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 2.3e-81 307.4 456 40.1
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 1.2e-77 295.0 403 41.7
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.0e-73 282.0 464 37.3
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 8.8e-73 278.9 402 39.3
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.7e-71 274.6 319 46.4
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 2.8e-71 273.9 452 37.2
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 4.8e-71 273.1 393 39.2
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 1.0e-68 265.4 244 54.9
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 1.0e-68 265.4 458 34.9
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 3.4e-64 250.4 209 56.9
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.8e-60 236.9 242 50.4
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.0e-49 202.2 263 45.2
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 5.4e-46 189.9 236 46.2
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 2.9e-44 184.1 296 38.5
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 6.2e-26 123.2 87 66.7
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 6.8e-25 119.8 402 26.9
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 5.6e-19 100.1 258 30.6
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 4.7e-18 97.1 151 37.7
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 5.2e-17 93.6 58 67.2
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.5e-16 92.0 54 72.2
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 7.6e-16 89.7 451 23.5
Oeu052072.1 Olea europaea HOM05D019196 ORTHO05D010845 7.6e-16 89.7 99 46.5
Hma1.2p1_1112F.1_g258640 Hydrangea macrophylla HOM05D009253 ORTHO05D010845 2.4e-14 84.7 87 52.9
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 2.1e-13 81.6 137 35.8
Sopen09g028650 Solanum pennellii HOM05D019196 ORTHO05D010845 1.3e-12 79.0 95 48.4
TAR362G0345 Trochodendron aralioides HOM05D009253 ORTHO05D010845 1.7e-12 78.6 102 44.1
Cfa002472 Carpinus fangiana HOM05D009253 ORTHO05D010845 3.0e-12 77.8 90 47.8
CAN.G1395.1 Capsicum annuum HOM05D019196 ORTHO05D010845 5.1e-12 77.0 82 46.3
AUR62008784 Chenopodium quinoa HOM05D050983 ORTHO05D044032 7.3e-11 73.2 91 46.2
CSS0049490 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 9.6e-11 72.8 96 42.7
Prupe.8G216600 Prunus persica HOM05D009253 ORTHO05D010845 1.3e-10 72.4 96 43.8
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 1.6e-10 72.0 44 70.5
Manes.12G035800 Manihot esculenta HOM05D009253 ORTHO05D010845 2.1e-10 71.6 99 42.4
TAR365G0673 Trochodendron aralioides HOM05D009253 ORTHO05D010845 1.4e-09 68.9 82 40.2
CSS0011456 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 2.4e-09 68.2 97 39.2
CiPaw.03G269700 Carya illinoinensis HOM05D009253 ORTHO05D010845 3.1e-09 67.8 84 44.0
COL.COLO4_10585 Corchorus olitorius HOM05D009253 ORTHO05D010845 5.8e-08 63.5 91 40.7
Sed0026815 Sechium edule HOM05D009253 ORTHO05D010845 7.6e-08 63.2 81 46.9
Manes.13G040700 Manihot esculenta HOM05D009253 ORTHO05D010845 1.3e-07 62.4 92 40.2
CSS0015409 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 1.7e-07 62.0 84 39.3
RcHm_v2.0_Chr6g0286891 Rosa chinensis HOM05D009253 ORTHO05D010845 1.7e-07 62.0 96 44.8
Sed0026637 Sechium edule HOM05D009253 ORTHO05D010845 3.8e-07 60.8 74 47.3
Gohir.A07G150900 Gossypium hirsutum HOM05D009253 ORTHO05D010845 8.4e-07 59.7 85 38.8
Potri.014G192100 Populus trichocarpa HOM05D009253 ORTHO05D010845 1.1e-06 59.3 91 38.5
C07p26600 Brassica napus HOM05D007808 ORTHO05D009895 1.9e-06 58.5 145 32.4
BraA06t27623Z Brassica rapa HOM05D007808 ORTHO05D009895 1.9e-06 58.5 91 42.9
Gohir.D07G157500 Gossypium hirsutum HOM05D009253 ORTHO05D010845 2.4e-06 58.2 83 39.8
CiPaw.04G189600 Carya illinoinensis HOM05D009253 ORTHO05D010845 5.4e-06 57.0 82 36.6
Rhsim01G0261100 Rhododendron simsii HOM05D000647 ORTHO05D000485 9.3e-06 56.2 94 42.6


User provided reference genes

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