Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 5.7e-144 514.2 257 100.0
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 6.6e-84 314.7 252 66.3
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 7.3e-83 311.2 271 64.2
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 2.1e-82 309.7 213 72.8
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 4.7e-82 308.5 268 64.9
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 4.7e-82 308.5 268 64.9
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 4.7e-82 308.5 268 64.9
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 4.0e-81 305.4 228 70.6
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 3.4e-80 302.4 182 78.6
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.4e-80 302.0 183 78.7
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.3e-79 300.4 204 73.0
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 1.7e-79 300.1 210 71.9
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 1.1e-78 297.4 189 75.7
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 1.4e-78 297.0 238 66.8
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 3.2e-78 295.8 181 78.5
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 4.1e-78 295.4 211 70.1
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.6e-77 293.5 290 60.0
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 2.7e-77 292.7 219 69.4
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 3.5e-77 292.4 236 65.7
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 4.6e-77 292.0 228 67.1
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 4.6e-77 292.0 228 67.1
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.6e-77 292.0 228 68.0
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.6e-77 292.0 226 66.4
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 6.0e-77 291.6 233 66.1
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 6.0e-77 291.6 190 75.3
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.0e-77 291.6 190 75.3
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.0e-77 291.6 201 72.1
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 6.0e-77 291.6 207 72.0
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 7.8e-77 291.2 228 67.5
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 1.0e-76 290.8 223 68.6
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.3e-76 290.4 189 74.1
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 1.7e-76 290.0 215 69.8
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 2.3e-76 289.7 267 59.9
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 5.1e-76 288.5 201 71.6
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.1e-75 287.3 226 66.4
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.5e-75 287.0 230 67.4
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 1.9e-75 286.6 176 77.3
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 2.5e-75 286.2 227 65.6
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 3.3e-75 285.8 175 77.7
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 4.3e-75 285.4 229 65.5
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 5.6e-75 285.0 232 63.8
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 9.5e-75 284.3 209 67.5
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 1.2e-74 283.9 274 59.9
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 1.2e-74 283.9 247 63.2
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.2e-74 283.9 281 59.1
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 6.2e-74 281.6 200 72.0
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 8.1e-74 281.2 172 79.1
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 1.4e-73 280.4 227 64.3
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 1.4e-73 280.4 170 78.8
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.8e-73 280.0 231 64.9
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.8e-73 280.0 231 64.9
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 1.8e-73 280.0 224 67.9
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 1.8e-73 280.0 222 64.4
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 2.3e-73 279.6 267 59.2
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 3.1e-73 279.3 228 63.2
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 4.0e-73 278.9 227 64.8
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 4.0e-73 278.9 225 66.2
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 6.8e-73 278.1 231 64.9
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 8.9e-73 277.7 277 60.3
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 2.0e-72 276.6 207 66.7
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.0e-72 276.6 285 57.9
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 7.6e-72 274.6 230 64.8
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 9.9e-72 274.2 286 57.7
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 2.2e-71 273.1 191 68.6
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.2e-71 273.1 281 56.9
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 2.4e-70 269.6 288 56.2
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 9.2e-70 267.7 259 58.3
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 1.2e-69 267.3 260 58.5
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.2e-69 267.3 249 61.0
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.3e-68 263.8 276 54.0
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 1.7e-68 263.5 225 60.0
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 1.7e-68 263.5 298 52.3
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.7e-68 263.5 276 53.6
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 1.1e-67 260.8 164 73.2
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 4.3e-67 258.8 275 53.1
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 9.6e-67 257.7 254 57.1
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 1.6e-66 256.9 176 69.9
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 8.1e-66 254.6 283 50.9
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.2e-64 250.8 300 51.0
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 5.8e-64 248.4 198 60.1
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 7.6e-64 248.1 234 57.7
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 3.2e-62 242.7 272 50.4
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 4.2e-62 242.3 280 49.6
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 3.9e-60 235.7 259 49.8
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 6.6e-60 235.0 275 54.9
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 1.5e-59 233.8 140 74.3
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 5.6e-51 205.3 259 45.2
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 3.7e-50 202.6 261 46.0
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 4.9e-47 192.2 252 45.2
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.4e-46 189.9 101 84.2
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 1.9e-43 180.3 103 72.8
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 3.4e-40 169.5 146 61.6
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 1.3e-36 157.5 277 39.7
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 7.4e-35 151.8 263 38.8
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.4e-33 146.7 77 83.1
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.4e-33 146.7 77 83.1
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 1.5e-32 144.1 214 42.1
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 1.7e-31 140.6 243 42.0
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 1.7e-31 140.6 180 46.7
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 2.4e-25 120.2 187 46.0
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.5e-22 110.2 95 58.9
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 2.4e-17 93.6 136 30.9
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 1.2e-16 91.3 140 27.9
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 2.6e-16 90.1 124 34.7
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 7.7e-16 88.6 114 35.1
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 1.3e-15 87.8 131 32.8
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 1.7e-15 87.4 114 34.2
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 3.3e-11 73.2 206 33.5
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 5.7e-11 72.4 155 35.5
PGSC0003DMG400009632 Solanum tuberosum HOM05D005457 ORTHO05D006350 3.5e-08 63.2 43 67.4
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 6.5e-07 58.9 179 34.1


User provided reference genes

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