Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C0T7 Lonicera japonica HOM05D008679 ORTHO05D010804 2.9e-106 388.7 204 100.0
Lj2P184T43 Lonicera japonica HOM05D008679 ORTHO05D010804 3.5e-96 355.1 203 92.6
Dinv38933 Davidia involucrata HOM05D008679 ORTHO05D010804 2.7e-48 196.1 203 54.7
Actinidia14568 Actinidia chinensis HOM05D008679 ORTHO05D010804 7.9e-40 167.9 202 48.5
Actinidia01999 Actinidia chinensis HOM05D008679 ORTHO05D010804 4.3e-38 162.2 206 49.5
Hma1.2p1_0896F.1_g234080 Hydrangea macrophylla HOM05D008679 ORTHO05D010804 2.2e-37 159.8 206 47.1
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 1.0e-34 151.0 203 45.3
Rhsim02G0231800 Rhododendron simsii HOM05D008679 ORTHO05D010804 4.6e-32 142.1 205 43.9
QL12p032781 Quercus lobata HOM05D008679 ORTHO05D010804 1.1e-25 120.9 172 43.0
Dinv37632 Davidia involucrata HOM05D008679 ORTHO05D010804 4.7e-24 115.5 202 40.1
Oeu007747.1 Olea europaea HOM05D008679 ORTHO05D010804 6.1e-24 115.2 211 36.0
TAR375G0988 Trochodendron aralioides HOM05D008679 ORTHO05D010804 2.6e-22 109.8 199 37.2
TAR374G0287 Trochodendron aralioides HOM05D008679 ORTHO05D010804 3.3e-22 109.4 209 36.4
Cfa012221 Carpinus fangiana HOM05D008679 ORTHO05D010804 4.8e-21 105.5 170 41.2
Potri.001G103200 Populus trichocarpa HOM05D008679 ORTHO05D010804 1.6e-19 100.5 168 38.1
Ciclev10019505m.g Citrus clementina HOM05D008679 ORTHO05D010804 1.3e-18 97.4 169 37.3
Sabra01G0077900 Salix brachista HOM05D008679 ORTHO05D010804 1.9e-17 93.6 168 36.9
Prupe.5G101200 Prunus persica HOM05D008679 ORTHO05D010804 2.5e-17 93.2 169 42.0
TWI15G0527 Tripterygium wilfordii HOM05D008679 ORTHO05D010804 3.2e-17 92.8 169 39.6
Nn1g01544 Nelumbo nucifera HOM05D008679 ORTHO05D010804 5.5e-17 92.0 152 38.2
Manes.02G019900 Manihot esculenta HOM05D008679 ORTHO05D010804 1.2e-16 90.9 169 34.9
Thecc.03G280000 Theobroma cacao HOM05D008679 ORTHO05D010804 8.0e-16 88.2 180 36.7
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.0e-15 87.8 167 36.5
Duzib084G0348 Durio zibethinus HOM05D008679 ORTHO05D010804 1.4e-15 87.4 188 38.3
MSTRG.11979 Avicennia marina HOM05D008679 ORTHO05D010804 1.5e-14 84.0 205 32.7
Potri.003G128400 Populus trichocarpa HOM05D008679 ORTHO05D010804 3.3e-14 82.8 188 33.5
Duzib205G1921 Durio zibethinus HOM05D008679 ORTHO05D010804 5.7e-14 82.0 178 36.0
Gohir.A12G230100 Gossypium hirsutum HOM05D008679 ORTHO05D010804 4.8e-13 79.0 202 33.7
Gohir.D12G231200 Gossypium hirsutum HOM05D008679 ORTHO05D010804 8.2e-13 78.2 181 34.8
Gorai.008G247400 Gossypium raimondii HOM05D008679 ORTHO05D010804 8.2e-13 78.2 181 34.8
Cpa.g.sc74.7 Carica papaya HOM05D008679 ORTHO05D010804 2.4e-12 76.6 189 33.3
PGR031G2708 Punica granatum HOM05D008679 ORTHO05D010804 3.1e-12 76.3 157 36.9
DCAR_000618 Daucus carota HOM05D008679 ORTHO05D010804 7.0e-12 75.1 233 30.9
RcHm_v2.0_Chr7g0197481 Rosa chinensis HOM05D008679 ORTHO05D010804 7.0e-12 75.1 143 37.1
SGA_v2.0_scaffold173G39173 Striga asiatica HOM05D033559 ORTHO05D010804 2.7e-11 73.2 202 31.2
SGA_v2.0_scaffold360G49893 Striga asiatica HOM05D033559 ORTHO05D000309 2.7e-11 73.2 188 31.9
COL.COLO4_34476 Corchorus olitorius HOM05D008679 ORTHO05D010804 1.7e-10 70.5 178 30.9
MD06G1085200 Malus domestica HOM05D008679 ORTHO05D010804 1.6e-08 63.9 162 32.7
ECA240G3768 Erigeron canadensis HOM05D008679 ORTHO05D010804 2.1e-08 63.5 224 29.0
THA.LOC104809395 Tarenaya hassleriana HOM05D012463 ORTHO05D014408 4.7e-08 62.4 179 31.8
FvH4_5g02611 Fragaria vesca HOM05D008679 ORTHO05D010804 2.6e-06 56.6 163 30.7
FAN18G1823 Fragaria x ananassa HOM05D008679 ORTHO05D010804 2.6e-06 56.6 163 30.7
Migut.A00736 Erythranthe guttata HOM05D033559 ORTHO05D010804 5.7e-06 55.5 225 27.1


User provided reference genes

Program Settings