Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 8.9e-296 1019.6 549 100.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 8.6e-158 561.2 528 61.0
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.9e-147 525.0 520 58.1
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 2.7e-143 513.1 532 55.3
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 9.6e-141 504.6 517 56.5
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.4e-139 500.0 549 54.5
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 9.0e-139 498.0 532 55.1
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.1e-135 486.9 534 53.7
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.0e-134 483.0 532 52.8
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 3.9e-134 482.6 520 54.4
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 3.3e-133 479.6 533 52.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 5.6e-133 478.8 525 52.8
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 2.1e-132 476.9 529 52.6
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 9.0e-131 471.5 526 51.5
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 1.2e-130 471.1 520 53.8
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.2e-130 471.1 495 55.2
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.9e-129 466.5 494 54.5
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.9e-129 466.5 528 53.0
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 5.5e-128 462.2 520 52.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.5e-128 462.2 524 53.1
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 9.3e-128 461.5 507 52.3
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.5e-127 459.5 513 52.4
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 4.6e-127 459.1 524 51.9
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 7.9e-127 458.4 523 51.8
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 7.9e-127 458.4 524 52.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.3e-126 457.6 512 51.8
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.8e-126 457.2 505 50.7
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 1.1e-125 454.5 511 51.5
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.5e-125 454.1 524 51.9
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.5e-125 453.4 523 50.3
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.3e-125 453.0 522 52.7
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 5.7e-125 452.2 511 52.3
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 5.7e-125 452.2 523 52.0
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.3e-124 451.1 509 51.7
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 2.8e-124 449.9 510 52.7
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 2.8e-124 449.9 504 52.8
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.7e-124 449.5 506 53.2
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.8e-123 447.2 499 51.3
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.4e-123 446.8 495 52.9
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.4e-123 446.8 519 52.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 4.0e-123 446.0 519 52.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 1.5e-122 444.1 511 50.9
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 3.4e-122 443.0 517 49.3
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.2e-121 440.3 507 50.1
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 6.5e-121 438.7 514 51.0
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.9e-120 437.2 498 51.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 2.5e-120 436.8 505 49.5
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 6.1e-119 432.2 502 49.8
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.0e-118 431.4 509 50.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.8e-118 430.6 509 50.5
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 3.0e-118 429.9 502 50.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 6.7e-118 428.7 424 57.8
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 4.1e-115 419.5 527 49.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.0e-113 414.8 508 49.2
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 2.2e-113 413.7 510 49.2
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 3.8e-113 412.9 494 50.6
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 6.5e-113 412.1 474 51.3
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 8.5e-113 411.8 534 46.6
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 8.5e-113 411.8 508 48.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.1e-112 411.4 515 45.8
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 4.2e-112 409.5 527 48.2
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 6.1e-111 405.6 543 49.2
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.0e-110 404.8 423 52.5
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.0e-110 404.8 423 52.5
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 3.0e-110 403.3 507 47.7
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 3.9e-110 402.9 416 53.1
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 8.8e-110 401.7 528 45.6
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 8.8e-110 401.7 519 47.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 3.3e-109 399.8 523 46.1
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 3.7e-108 396.4 526 45.6
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-108 396.0 370 60.0
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.1e-107 394.8 503 49.1
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.8e-107 394.0 535 45.6
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 3.1e-107 393.3 526 45.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 3.8e-105 386.3 521 45.3
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.9e-104 384.0 510 46.1
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 3.2e-104 383.3 570 42.6
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 5.5e-104 382.5 527 45.4
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 3.6e-103 379.8 522 45.0
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 8.8e-102 375.2 411 52.3
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 2.2e-100 370.5 514 44.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 7.0e-99 365.5 501 45.7
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.2e-98 364.8 510 43.5
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 3.5e-98 363.2 524 46.9
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.0e-97 361.7 531 44.8
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.7e-97 360.9 501 45.5
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.2e-97 360.5 524 44.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 6.1e-95 352.4 524 43.9
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.5e-93 347.8 523 45.5
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.3e-92 344.7 490 42.7
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 8.8e-86 322.0 526 39.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.5e-85 321.2 494 41.7
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 2.5e-80 303.9 471 44.8
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.5e-77 294.7 418 42.8
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 4.9e-76 289.7 502 39.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.6e-71 274.6 517 37.5
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.4e-70 271.6 520 37.1
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.0e-62 243.4 321 43.9
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 2.6e-61 240.7 266 49.6
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.0e-57 228.8 488 35.0
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 4.9e-52 209.9 522 31.2
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.2e-50 205.3 556 30.4
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.0e-49 200.7 197 55.8
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 2.5e-48 197.6 450 32.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.2e-45 188.7 393 32.8
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 3.5e-42 177.2 207 51.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 4.0e-38 163.7 298 36.9
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 6.8e-38 162.9 256 43.8
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.2e-34 152.1 156 51.3
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 9.6e-32 142.5 120 66.7
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.4e-30 137.9 259 37.5
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.4e-21 107.5 321 28.3
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.5e-19 100.1 88 61.4
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 7.4e-16 89.7 283 26.9
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.4e-14 85.5 136 41.9
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.5e-12 76.6 65 67.7
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.9e-11 75.1 113 43.4
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 5.5e-11 73.6 70 51.4
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.9e-08 65.1 90 46.7
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.6e-07 62.0 98 40.8
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 1.1e-06 59.3 99 42.4
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 1.8e-06 58.5 97 42.3
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.1e-06 57.8 62 46.8
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 3.1e-06 57.8 97 40.2
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 3.1e-06 57.8 118 37.3


User provided reference genes

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