Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.2e-184 649.4 504 100.0
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 2.7e-57 227.3 519 50.1
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 5.3e-45 186.4 524 37.6
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.8e-40 171.4 378 39.7
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.8e-40 171.4 280 46.4
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.8e-40 171.4 280 46.4
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 3.0e-40 170.6 302 45.4
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 2.8e-38 164.1 516 40.3
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.1e-37 160.6 525 47.6
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 5.3e-37 159.8 260 45.4
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.2e-36 158.7 571 34.2
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 5.0e-35 153.3 513 41.1
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 5.0e-35 153.3 261 44.1
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.1e-34 152.1 518 38.4
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.9e-34 151.4 533 40.9
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 5.5e-34 149.8 254 41.3
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 3.6e-33 147.1 528 42.2
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 6.7e-32 142.9 546 40.5
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 6.7e-32 142.9 279 38.0
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 8.8e-32 142.5 331 39.3
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.7e-31 139.8 505 38.6
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 9.7e-31 139.0 502 39.0
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.3e-30 138.7 253 40.7
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 3.7e-30 137.1 256 42.6
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.4e-29 135.2 562 37.9
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.4e-29 135.2 562 37.7
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 5.3e-29 133.3 295 38.0
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 7.0e-29 132.9 555 37.8
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 1.6e-28 131.7 326 50.6
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 1.3e-27 128.6 507 45.8
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 8.5e-27 125.9 276 38.0
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.9e-26 124.8 325 47.4
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.2e-26 124.0 513 38.8
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 5.5e-26 123.2 298 39.6
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 9.4e-26 122.5 270 39.3
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 9.4e-26 122.5 366 40.2
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 4.7e-25 120.2 274 34.7
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.7e-25 120.2 273 34.8
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 4.7e-25 120.2 265 35.1
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.1e-25 119.8 274 34.7
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 6.1e-25 119.8 251 38.2
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 1.0e-24 119.0 290 34.8
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 1.4e-24 118.6 259 39.8
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.8e-24 118.2 155 48.4
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 2.3e-24 117.9 287 36.6
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.5e-23 115.2 568 33.1
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 9.7e-23 112.5 282 36.2
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 8.2e-22 109.4 257 37.0
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 1.4e-21 108.6 348 44.5
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 1.8e-21 108.2 271 34.3
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 3.1e-21 107.5 276 34.8
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 9.1e-21 105.9 279 33.0
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 2.0e-20 104.8 274 32.5
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 2.0e-20 104.8 279 33.7
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 2.0e-20 104.8 264 36.0
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 2.0e-20 104.8 296 36.5
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.5e-20 104.0 285 32.3
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 4.5e-20 103.6 272 33.8
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.0e-19 102.4 274 36.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.0e-19 102.4 285 34.4
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 3.8e-19 100.5 349 30.1
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 5.0e-19 100.1 283 33.6
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.1e-18 99.0 272 33.1
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.1e-18 99.0 287 37.6
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 1.1e-18 99.0 282 37.2
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 1.5e-18 98.6 263 35.0
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.2e-18 97.4 305 32.1
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 3.2e-18 97.4 274 37.6
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 5.5e-18 96.7 251 37.1
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 2.7e-17 94.4 258 34.1
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 8.0e-17 92.8 284 34.2
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 1.4e-16 92.0 244 34.8
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 4.0e-16 90.5 275 31.6
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 6.8e-16 89.7 274 29.9
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.2e-15 89.0 269 33.8
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.6e-15 87.8 264 33.7
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 2.6e-15 87.8 257 31.5
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 4.4e-15 87.0 296 32.8
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 5.7e-15 86.7 278 34.5
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 7.5e-15 86.3 507 33.3
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 7.5e-15 86.3 255 31.8
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 2.2e-14 84.7 272 33.1
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 2.8e-14 84.3 172 51.7
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.4e-13 82.0 165 38.2
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.4e-13 81.3 558 34.9
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 3.1e-13 80.9 272 32.4
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 6.6e-11 73.2 45 82.2
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.9e-10 71.6 288 27.8
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.9e-10 71.6 350 42.6
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 1.6e-09 68.6 253 32.4
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 4.7e-09 67.0 61 50.8
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 1.0e-08 65.9 261 30.3
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 2.3e-08 64.7 249 29.3
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 3.0e-08 64.3 269 29.4
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.2e-07 62.4 192 39.6
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 1.2e-07 62.4 262 27.9
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.0e-07 61.6 45 68.9
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 5.7e-07 60.1 66 43.9
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 7.5e-07 59.7 259 30.9
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 9.8e-07 59.3 263 25.9
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 9.8e-07 59.3 132 35.6
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.7e-06 58.5 42 71.4
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 3.7e-06 57.4 259 25.1
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 4.9e-06 57.0 253 28.9
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 8.3e-06 56.2 262 25.2


User provided reference genes

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