Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 9.8e-250 866.3 429 100.0
Lj2A1036G45 Lonicera japonica HOM05D001538 ORTHO05D000007 2.7e-114 416.4 424 59.7
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 1.5e-104 384.0 467 53.1
Lju41C39G13 Lonicera japonica HOM05D001538 ORTHO05D011045 4.5e-77 292.7 235 68.9
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 1.8e-73 280.8 206 70.4
Lj2C23T9 Lonicera japonica HOM05D001538 ORTHO05D011045 6.7e-73 278.9 235 65.5
Lj1C330G10 Lonicera japonica HOM05D001538 ORTHO05D000007 5.3e-70 269.2 210 68.6
Lju760A7G21 Lonicera japonica HOM05D001538 ORTHO05D011045 1.4e-67 261.2 231 61.5
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-60 238.0 134 85.1
Lj4A815T24 Lonicera japonica HOM05D012945 ORTHO05D000007 2.5e-59 233.8 222 61.7
Lj6C526G1 Lonicera japonica HOM05D001538 ORTHO05D011045 4.2e-59 233.0 168 73.2
Lj9P687T30 Lonicera japonica HOM05D012945 ORTHO05D000007 1.8e-57 227.6 170 72.4
Lju760C7G6 Lonicera japonica HOM05D012945 ORTHO05D000007 2.8e-47 193.7 149 71.1
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 4.2e-43 179.9 170 55.9
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 5.5e-43 179.5 458 33.6
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-42 177.6 500 31.6
Lj7C620T12 Lonicera japonica HOM05D001538 ORTHO05D011045 4.4e-40 169.9 233 50.2
Lj7C297T8 Lonicera japonica HOM05D001538 ORTHO05D004667 1.6e-37 161.4 162 57.4
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 3.8e-36 156.8 417 33.1
Lj7C754G12 Lonicera japonica HOM05D001538 ORTHO05D004667 5.5e-35 152.9 113 71.7
Lj4C412G6 Lonicera japonica HOM05D001538 ORTHO05D011045 8.0e-34 149.1 113 69.0
Lj9A98T13 Lonicera japonica HOM05D010180 ORTHO05D000007 1.3e-31 141.7 179 45.3
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-30 138.7 205 42.4
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 3.1e-30 137.1 112 55.4
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-29 135.2 136 48.5
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 2.0e-29 134.4 191 41.4
Lj8C478T4 Lonicera japonica HOM05D001538 ORTHO05D000007 3.5e-29 133.7 183 45.4
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 7.7e-29 132.5 146 47.9
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 6.6e-28 129.4 502 25.7
Lj5C834G10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-27 127.5 442 30.5
Lj6C228T14 Lonicera japonica HOM05D010180 ORTHO05D011045 1.4e-25 121.7 123 51.2
Lj1C10G6 Lonicera japonica HOM05D001538 ORTHO05D004667 2.3e-25 120.9 422 30.1
Lj7A729G39 Lonicera japonica HOM05D010180 ORTHO05D002396 3.0e-25 120.6 175 41.7
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-24 117.9 119 45.4
Lj3P241T16 Lonicera japonica HOM05D010180 ORTHO05D011045 1.3e-23 115.2 175 41.1
Lj7A15G46 Lonicera japonica HOM05D000062 ORTHO05D011045 1.3e-23 115.2 96 64.6
Lj1A545G61 Lonicera japonica HOM05D000764 ORTHO05D011045 2.9e-23 114.0 215 37.2
Lj3P693T50 Lonicera japonica HOM05D001538 ORTHO05D011045 2.9e-23 114.0 168 41.1
Lj2A1218G28 Lonicera japonica HOM05D012945 ORTHO05D000007 3.2e-22 110.5 142 42.3
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 2.7e-21 107.5 222 35.6
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 2.7e-21 107.5 134 41.0
Lj9P658T31 Lonicera japonica HOM05D001538 ORTHO05D011045 5.9e-21 106.3 168 38.7
Lj4C390T3 Lonicera japonica HOM05D010180 ORTHO05D011045 6.6e-20 102.8 180 36.7
Lju2566C0G3 Lonicera japonica HOM05D001538 ORTHO05D011045 6.6e-20 102.8 181 33.7
Lj3C187G11 Lonicera japonica HOM05D001538 ORTHO05D004667 1.9e-19 101.3 90 65.6
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 4.3e-19 100.1 104 42.3
Lj2C1219T20 Lonicera japonica HOM05D001538 ORTHO05D234715 1.2e-18 98.6 361 28.5
Lju50C41T1 Lonicera japonica HOM05D001538 ORTHO05D234057 1.6e-18 98.2 178 36.5
Lj5C610T14 Lonicera japonica HOM05D001538 ORTHO05D007090 3.6e-18 97.1 173 41.6
Lj9C653T10 Lonicera japonica HOM05D001538 ORTHO05D004667 4.7e-18 96.7 207 34.8
Lj9P81T10 Lonicera japonica HOM05D001538 ORTHO05D011045 1.0e-17 95.5 205 35.1
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 4.0e-17 93.6 151 40.4
Lj8P453T33 Lonicera japonica HOM05D001538 ORTHO05D235431 1.5e-16 91.7 210 35.2
Lju521C0T3 Lonicera japonica HOM05D001538 ORTHO05D011045 2.6e-16 90.9 174 36.2
Lj3C82G2 Lonicera japonica HOM05D001538 ORTHO05D011045 3.4e-16 90.5 163 37.4
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 2.2e-15 87.8 135 38.5
Lj7C583G3 Lonicera japonica HOM05D005757 ORTHO05D007090 2.2e-15 87.8 133 46.6
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 2.2e-15 87.8 145 34.5
Lj8A171T44 Lonicera japonica HOM05D010180 ORTHO05D011045 3.7e-15 87.0 138 39.9
Lj3P275T12 Lonicera japonica HOM05D001538 ORTHO05D011045 1.1e-14 85.5 154 36.4
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 1.9e-14 84.7 151 33.8
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 1.9e-14 84.7 62 59.7
Lj6P255T28 Lonicera japonica HOM05D001538 ORTHO05D234218 3.2e-14 84.0 119 38.7
Lj6P265T37 Lonicera japonica HOM05D001538 ORTHO05D235040 3.2e-14 84.0 119 38.7
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 7.0e-14 82.8 90 41.1
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-13 82.0 381 26.0
Lj2C488T1 Lonicera japonica HOM05D001538 ORTHO05D000007 1.6e-13 81.6 326 28.5
Lj9C91T6 Lonicera japonica HOM05D001538 ORTHO05D011045 1.6e-13 81.6 122 46.7
Lj3P1001T27 Lonicera japonica HOM05D001538 ORTHO05D011045 2.0e-13 81.3 154 36.4
Lju963C5T12 Lonicera japonica HOM05D010180 ORTHO05D011045 3.5e-13 80.5 95 48.4
Lj7C754G14 Lonicera japonica HOM05D012945 ORTHO05D234147 4.6e-13 80.1 75 64.0
Lju225C4G7 Lonicera japonica HOM05D001538 ORTHO05D011045 6.0e-13 79.7 240 30.8
Lj2C1218G1 Lonicera japonica HOM05D001538 ORTHO05D235847 7.8e-13 79.3 209 31.1
Lj1P829T29 Lonicera japonica HOM05D001538 ORTHO05D235877 1.7e-12 78.2 61 59.0
Lj7A234T36 Lonicera japonica HOM05D001538 ORTHO05D234496 3.0e-12 77.4 108 44.4
Lj8P479T52 Lonicera japonica HOM05D001538 ORTHO05D234728 6.6e-12 76.3 103 41.7
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 1.1e-11 75.5 127 33.1
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.1e-11 75.5 111 31.5
Lj2C15G8 Lonicera japonica HOM05D001538 ORTHO05D234020 1.1e-11 75.5 61 57.4
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 1.5e-11 75.1 126 30.2
Lj2C1036G2 Lonicera japonica HOM05D012945 ORTHO05D235679 1.9e-11 74.7 70 58.6
Lju1220C2G3 Lonicera japonica HOM05D001538 ORTHO05D011045 1.9e-11 74.7 168 32.7
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 3.3e-11 73.9 135 34.1
Lj3P30T33 Lonicera japonica HOM05D010180 ORTHO05D011045 4.3e-11 73.6 91 46.2
Lj6A56G21 Lonicera japonica HOM05D001538 ORTHO05D000007 5.6e-11 73.2 199 29.6
Lj5A843T17 Lonicera japonica HOM05D001538 ORTHO05D000007 1.6e-10 71.6 107 39.3
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 3.6e-10 70.5 134 30.6
Lj2P897T19 Lonicera japonica HOM05D010180 ORTHO05D011045 3.6e-10 70.5 91 47.3
Lju1040C2T6 Lonicera japonica HOM05D010180 ORTHO05D235247 3.6e-10 70.5 61 54.1
Lju41C55T6 Lonicera japonica HOM05D001538 ORTHO05D235798 6.2e-10 69.7 149 34.2
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 8.1e-10 69.3 85 35.3
Lj2A1219T41 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-09 68.9 97 37.1
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-09 68.6 140 28.6
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-09 68.6 140 28.6
Lju2566A0G20 Lonicera japonica HOM05D001538 ORTHO05D004667 1.8e-09 68.2 86 47.7
Lju521A0G34 Lonicera japonica HOM05D001538 ORTHO05D233929 1.8e-09 68.2 154 31.2
Lj4C847T12 Lonicera japonica HOM05D001538 ORTHO05D007090 2.3e-09 67.8 326 28.5
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-09 67.8 141 30.5
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-09 67.8 85 34.1
Lj2C1217T9 Lonicera japonica HOM05D010180 ORTHO05D011045 5.2e-09 66.6 108 35.2
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 5.2e-09 66.6 97 30.9
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 6.8e-09 66.2 81 40.7
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 1.5e-08 65.1 99 33.3
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-08 65.1 127 32.3
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-08 64.3 130 31.5
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-08 64.3 147 29.9
Lj1A1222T74 Lonicera japonica HOM05D001538 ORTHO05D234008 4.4e-08 63.5 86 44.2
Lj3P57T17 Lonicera japonica HOM05D010180 ORTHO05D011045 4.4e-08 63.5 83 44.6
FvH4_2g29541 Fragaria vesca HOM05D001538 ORTHO05D000007 5.8e-08 63.2 125 33.6
Lj9A92G12 Lonicera japonica HOM05D001538 ORTHO05D036482 5.8e-08 63.2 50 62.0
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-08 63.2 99 31.3
Lju521P0T33 Lonicera japonica HOM05D012945 ORTHO05D000007 7.5e-08 62.8 96 40.6
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 7.5e-08 62.8 126 30.2
PSO761G0353 Papaver somniferum HOM05D001538 ORTHO05D000007 7.5e-08 62.8 83 37.3
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-07 62.0 107 33.6
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-07 61.6 135 26.7
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-07 61.6 154 29.2
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-07 61.6 126 31.0
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-07 61.2 84 27.4
Lj7C143G3 Lonicera japonica HOM05D001538 ORTHO05D011045 2.2e-07 61.2 85 44.7
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 2.2e-07 61.2 132 26.5
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.2e-07 61.2 120 30.8
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 3.7e-07 60.5 106 31.1
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 3.7e-07 60.5 102 33.3
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 3.7e-07 60.5 146 31.5
Aqoxy2G01991 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.9e-07 60.1 134 28.4
Lj1A301G14 Lonicera japonica HOM05D001538 ORTHO05D004667 8.3e-07 59.3 203 31.0
Lj1C11T4 Lonicera japonica HOM05D010180 ORTHO05D011045 8.3e-07 59.3 96 40.6
Lju515C2T6 Lonicera japonica HOM05D010180 ORTHO05D011045 8.3e-07 59.3 73 46.6
Aqoxy5G02677 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.1e-06 58.9 85 37.6
Lju41C24T0 Lonicera japonica HOM05D001538 ORTHO05D234144 1.1e-06 58.9 118 37.3
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-06 58.5 123 28.5
Lj7C754G16 Lonicera japonica HOM05D001538 ORTHO05D234672 1.4e-06 58.5 63 55.6
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-06 58.5 67 37.3
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 1.9e-06 58.2 59 50.8
Lj6A516G44 Lonicera japonica HOM05D010180 ORTHO05D002407 1.9e-06 58.2 40 57.5
PSO170G5636 Papaver somniferum HOM05D002145 ORTHO05D000007 1.9e-06 58.2 83 32.5
PSO421G0505 Papaver somniferum HOM05D002145 ORTHO05D000007 1.9e-06 58.2 84 33.3
PSO541G3845 Papaver somniferum HOM05D001538 ORTHO05D000007 1.9e-06 58.2 59 40.7
PSO541G4910 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-06 58.2 79 29.1
PSO675G3548 Papaver somniferum HOM05D002145 ORTHO05D000007 1.9e-06 58.2 118 28.0
PSO731G0084 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 58.2 82 34.1
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-06 58.2 98 33.7
Lj2C1218T8 Lonicera japonica HOM05D001538 ORTHO05D011045 2.4e-06 57.8 81 45.7
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 3.2e-06 57.4 151 27.2
PSO357G0040 Papaver somniferum HOM05D002145 ORTHO05D000007 3.2e-06 57.4 123 29.3
PSO063G3115 Papaver somniferum HOM05D002145 ORTHO05D000007 4.1e-06 57.0 84 27.4
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 4.1e-06 57.0 135 28.1
Lj4C9G2 Lonicera japonica HOM05D010180 ORTHO05D011045 7.1e-06 56.2 81 38.3
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 9.2e-06 55.8 162 27.8
PSO339G4186 Papaver somniferum HOM05D002145 ORTHO05D000007 9.2e-06 55.8 96 31.2
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 9.2e-06 55.8 60 40.0


User provided reference genes

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