Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 0.0e+00 3145.5 1672 100.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 1953.3 1730 63.4
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 0.0e+00 1864.4 1718 60.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 0.0e+00 1846.6 1722 60.8
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 0.0e+00 1841.6 1742 60.2
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 0.0e+00 1837.8 1726 60.4
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 0.0e+00 1823.1 1787 58.8
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 0.0e+00 1809.3 1718 59.7
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 0.0e+00 1803.1 1716 59.3
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 1801.6 1726 59.0
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 0.0e+00 1792.3 1729 58.5
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 0.0e+00 1764.2 1730 58.4
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 0.0e+00 1758.4 1725 58.5
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 0.0e+00 1756.9 1720 58.1
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 1751.5 1726 57.9
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 0.0e+00 1751.5 1758 57.7
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 1728.4 1716 58.0
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 0.0e+00 1723.8 1699 57.3
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 0.0e+00 1721.1 1735 57.5
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 1719.9 1719 57.4
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 0.0e+00 1714.1 1716 57.2
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 0.0e+00 1708.7 1693 58.5
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 0.0e+00 1705.6 1731 56.8
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 0.0e+00 1702.6 1716 57.1
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 0.0e+00 1695.6 1720 56.9
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 0.0e+00 1694.5 1716 56.9
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 0.0e+00 1694.1 1725 57.0
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 0.0e+00 1689.9 1727 56.2
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 1689.9 1715 57.1
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 1686.8 1722 56.5
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 1686.4 1724 56.4
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 1686.0 1718 56.4
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 0.0e+00 1684.8 1728 56.2
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 0.0e+00 1684.1 1729 57.5
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 1679.1 1723 56.9
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 1676.0 1722 56.1
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 0.0e+00 1676.0 1725 56.8
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 1673.3 1737 56.4
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 0.0e+00 1670.2 1680 58.9
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 0.0e+00 1669.4 1713 56.8
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 1669.4 1738 56.1
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 1667.9 1719 56.1
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 0.0e+00 1664.0 1722 55.8
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 1658.7 1722 56.1
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 0.0e+00 1656.7 1560 59.8
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 1654.0 1728 55.6
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 0.0e+00 1648.6 1720 56.2
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 0.0e+00 1643.2 1720 55.1
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 0.0e+00 1637.5 1732 55.0
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 0.0e+00 1625.5 1713 55.5
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 0.0e+00 1623.6 1724 55.7
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 0.0e+00 1622.4 1723 55.3
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 0.0e+00 1620.9 1745 54.3
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 0.0e+00 1617.8 1724 55.5
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 1616.7 1717 55.4
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1614.7 1576 58.6
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 0.0e+00 1608.6 1719 54.3
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 0.0e+00 1600.5 1717 54.2
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 1599.3 1694 55.3
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 0.0e+00 1592.8 1729 54.2
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 0.0e+00 1592.4 1714 55.3
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 0.0e+00 1590.9 1724 55.0
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 0.0e+00 1580.5 1743 53.5
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 1576.2 1711 53.4
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 1565.4 1316 65.0
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 0.0e+00 1560.4 1765 53.8
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 1560.0 1687 53.7
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 0.0e+00 1556.6 1721 56.2
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 0.0e+00 1549.3 1713 54.9
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 1546.2 1723 52.4
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1540.4 1453 59.7
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 0.0e+00 1535.8 1466 60.1
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1520.4 1439 59.6
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 1515.4 1687 51.6
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 0.0e+00 1511.1 1691 51.6
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 0.0e+00 1495.7 1703 52.1
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 0.0e+00 1495.7 1691 52.2
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 0.0e+00 1494.9 1691 52.3
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 0.0e+00 1490.7 1688 52.1
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 0.0e+00 1490.3 1691 52.0
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 0.0e+00 1488.4 1695 51.7
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1464.1 1674 51.5
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1464.1 1674 51.5
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1451.8 1689 50.7
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1448.0 1676 51.1
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 0.0e+00 1433.7 1692 50.6
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1425.6 1694 50.6
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1419.4 1686 51.2
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 0.0e+00 1419.4 1718 50.0
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1415.2 1697 50.4
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1388.2 1690 49.9
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 0.0e+00 1317.8 1280 58.6
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 0.0e+00 1305.4 1683 48.7
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 0.0e+00 1283.1 1716 47.3
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 0.0e+00 1254.2 1302 54.9
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1147.5 1297 54.2
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1117.4 1774 40.9
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1117.4 1774 40.9
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 0.0e+00 1092.4 1065 59.4
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 0.0e+00 1083.2 1695 42.4
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 0.0e+00 1078.9 1525 44.2
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 3.5e-287 992.6 864 62.5
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 4.6e-287 992.3 863 62.7
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 1.6e-284 983.8 865 62.4
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 4.1e-275 952.6 1715 39.0
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.3e-257 894.4 920 53.8
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 3.5e-242 843.2 1134 46.1
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 5.2e-230 802.7 1092 45.6
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 8.0e-223 778.9 1321 41.8
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 2.0e-213 747.7 703 60.7
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 5.8e-181 639.8 1117 38.9
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.4e-174 618.6 638 57.8
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 7.4e-168 596.3 1737 31.8
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.3e-159 568.9 516 60.1
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 4.8e-159 567.0 1727 29.6
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 1.6e-154 552.0 618 50.8
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.2e-117 429.5 405 58.3
Actinidia02701 Actinidia chinensis HOM05D000764 ORTHO05D004953 2.0e-117 428.7 320 71.2
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.0e-116 426.4 816 38.6
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 3.3e-115 421.4 1436 28.8
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 9.5e-107 393.3 593 42.7
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 3.3e-99 368.2 1683 25.7
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 3.5e-93 348.2 628 38.4
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.6e-90 339.3 1161 29.0
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 2.4e-70 272.3 357 47.3
Aqoxy6G02541 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.3e-68 265.8 304 50.0
VMungo1080G1023 Vigna mungo HOM05D000764 ORTHO05D004953 1.5e-67 263.1 209 65.1
CiPaw.14G136600 Carya illinoinensis HOM05D000764 ORTHO05D004953 8.1e-66 257.3 304 52.3
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 1.1e-65 256.9 308 49.4
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 5.8e-56 224.6 484 37.0
HPP92_009741 Vanilla planifolia HOM05D000764 ORTHO05D004953 2.7e-53 215.7 589 32.1
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 1.8e-49 203.0 316 44.9
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 2.5e-46 192.6 222 54.5
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-45 190.3 1100 23.5
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 1.6e-45 189.9 333 40.8
Dinv39953 Davidia involucrata HOM05D000100 ORTHO05D000052 3.6e-37 162.2 124 74.2
CAN.G1237.22 Capsicum annuum HOM05D000764 ORTHO05D004953 5.9e-32 144.8 91 78.0
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 2.6e-27 129.4 73 78.1
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 2.6e-27 129.4 112 60.7
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 2.8e-26 125.9 93 72.0
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 7.7e-24 117.9 215 44.2
Psat5g238800 Pisum sativum HOM05D000764 ORTHO05D002785 5.0e-23 115.2 85 75.3
Psat5g238960 Pisum sativum HOM05D000764 ORTHO05D002785 5.0e-23 115.2 85 75.3
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.5e-22 112.8 117 55.6
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 2.7e-21 109.4 108 63.0
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 3.6e-21 109.0 160 48.1
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 1.0e-20 107.5 81 72.8
CiPaw.14G136500 Carya illinoinensis HOM05D000764 ORTHO05D004953 5.3e-17 95.1 67 70.1
Rhsim12G0118500 Rhododendron simsii HOM05D000764 ORTHO05D004953 7.5e-11 74.7 44 77.3
CAN.G1237.23 Capsicum annuum HOM05D000764 ORTHO05D010647 1.4e-09 70.5 47 74.5
SHI31299 Sapria himalayana HOM05D000764 ORTHO05D004953 1.4e-09 70.5 91 53.8
Thhalv10012088m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 4.5e-08 65.5 76 52.6
Sc16g0012210 Simmondsia chinensis HOM05D000764 ORTHO05D004953 5.0e-07 62.0 48 62.5
C07p61900 Brassica napus HOM05D000764 ORTHO05D004953 1.9e-06 60.1 50 66.0
SMO358G0275 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 7.2e-06 58.2 54 44.4


User provided reference genes

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