Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.2e-36 155.2 84 100.0
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-33 145.6 82 96.3
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 6.0e-26 120.6 73 89.0
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.6e-24 114.0 70 84.3
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 9.5e-24 113.2 73 79.5
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.2e-23 112.8 73 76.7
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.1e-23 112.1 73 79.5
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.1e-23 112.1 70 82.9
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 2.8e-23 111.7 73 79.5
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 6.2e-23 110.5 70 80.0
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 8.1e-23 110.2 70 82.9
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 8.1e-23 110.2 73 78.1
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 8.1e-23 110.2 73 76.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.1e-22 109.8 72 80.6
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.8e-22 109.0 73 78.1
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.8e-22 109.0 73 74.0
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.1e-22 108.2 73 72.6
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 5.2e-22 107.5 70 77.1
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 6.8e-22 107.1 70 74.3
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.8e-22 107.1 73 74.0
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 6.8e-22 107.1 72 76.4
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 8.9e-22 106.7 72 79.2
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 8.9e-22 106.7 72 76.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 8.9e-22 106.7 70 80.0
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 8.9e-22 106.7 70 78.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.2e-21 106.3 70 75.7
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 1.5e-21 105.9 69 78.3
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.0e-21 105.5 70 78.6
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.6e-21 105.1 73 71.2
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 2.6e-21 105.1 70 74.3
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.6e-21 105.1 70 74.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 3.4e-21 104.8 70 72.9
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.4e-21 104.8 70 78.6
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.4e-21 104.8 73 69.9
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 4.4e-21 104.4 70 75.7
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 4.4e-21 104.4 70 74.3
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 4.4e-21 104.4 70 74.3
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 4.4e-21 104.4 73 71.2
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 5.8e-21 104.0 73 75.3
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 5.8e-21 104.0 70 72.9
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 7.5e-21 103.6 73 72.6
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 7.5e-21 103.6 73 74.0
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 7.5e-21 103.6 73 74.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 9.9e-21 103.2 73 72.6
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.7e-20 102.4 70 71.4
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.7e-20 102.4 72 72.2
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.7e-20 102.4 73 72.6
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.7e-20 102.4 73 72.6
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 2.2e-20 102.1 70 77.1
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.2e-20 102.1 72 72.2
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.7e-20 101.3 72 70.8
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.9e-20 100.9 73 69.9
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 4.9e-20 100.9 72 72.2
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 6.4e-20 100.5 73 69.9
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.4e-20 100.5 73 69.9
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 6.4e-20 100.5 72 72.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.3e-20 100.1 73 69.9
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.3e-20 100.1 73 69.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 8.3e-20 100.1 73 69.9
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.1e-19 99.8 97 55.7
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.1e-19 99.8 70 72.9
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.4e-19 99.4 69 72.5
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.4e-19 99.4 69 72.5
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.9e-19 99.0 70 71.4
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.9e-19 99.0 70 72.9
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.2e-19 98.2 70 72.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 3.2e-19 98.2 70 72.9
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 3.2e-19 98.2 73 71.2
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 4.1e-19 97.8 70 71.4
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 4.1e-19 97.8 70 71.4
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 5.4e-19 97.4 73 69.9
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 5.4e-19 97.4 92 58.7
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 9.2e-19 96.7 70 70.0
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 9.2e-19 96.7 73 67.1
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.2e-18 96.3 67 73.1
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.2e-18 96.3 69 72.5
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.2e-18 96.3 69 72.5
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.2e-18 96.3 70 70.0
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.6e-18 95.9 73 67.1
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.1e-18 95.5 70 67.1
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.1e-18 95.5 72 66.7
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.1e-18 95.5 70 68.6
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.6e-18 94.4 74 66.2
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 6.0e-18 94.0 70 67.1
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 6.0e-18 94.0 70 67.1
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.0e-17 93.2 70 67.1
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.3e-17 92.0 70 68.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 2.3e-17 92.0 72 62.5
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.3e-17 92.0 70 64.3
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 2.3e-17 92.0 70 64.3
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 5.1e-17 90.9 73 64.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.6e-17 90.1 70 65.7
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.1e-16 89.7 70 64.3
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.9e-16 89.0 70 70.0
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.3e-16 88.2 114 48.2
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.3e-16 87.8 72 63.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 7.3e-16 87.0 70 64.3
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 7.3e-16 87.0 70 64.3
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 9.5e-16 86.7 70 62.9
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 9.5e-16 86.7 70 62.9
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 9.5e-16 86.7 70 62.9
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 9.5e-16 86.7 70 62.9
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.2e-15 86.3 70 64.3
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.2e-15 86.3 84 57.1
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.6e-15 85.9 70 62.9
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.6e-15 84.7 72 62.5
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.4e-14 82.8 73 64.4
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.8e-14 80.5 70 57.1
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 8.9e-14 80.1 70 62.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.9e-13 76.6 70 54.3
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 9.9e-13 76.6 69 58.0
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.3e-12 76.3 48 75.0
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 1.7e-12 75.9 70 55.7
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.7e-12 75.9 68 57.4
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.1e-11 73.2 70 55.7
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.2e-11 71.6 70 55.7
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.1e-10 68.9 70 54.3
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.3e-09 66.2 67 55.2
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 3.0e-09 65.1 68 48.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 9.6e-08 60.1 36 83.3
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.6e-07 58.2 36 77.8
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 3.1e-06 55.1 75 48.0
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.9e-06 53.9 37 70.3


User provided reference genes

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