Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.4e-102 376.3 189 100.0
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 4.0e-78 295.0 193 79.3
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.5e-77 293.1 193 78.2
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.5e-77 293.1 193 78.2
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.5e-77 293.1 193 78.2
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.0e-77 292.7 193 77.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.4e-75 285.8 191 73.3
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.4e-75 285.8 191 73.3
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 4.1e-75 285.0 194 74.2
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 5.4e-75 284.6 190 75.8
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 7.0e-75 284.3 191 75.4
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 7.0e-75 284.3 191 75.4
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 1.2e-74 283.5 201 74.1
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.0e-74 282.7 194 74.2
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-74 282.7 194 74.2
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.5e-74 281.6 197 74.6
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 5.9e-74 281.2 191 74.9
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.8e-74 280.8 194 73.7
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.8e-74 280.8 194 73.7
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 7.8e-74 280.8 187 73.3
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.0e-73 280.4 176 77.8
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.0e-73 280.4 195 75.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-73 280.4 194 73.7
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.0e-73 280.4 194 74.2
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.7e-73 279.6 182 75.3
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.7e-73 279.6 191 71.7
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 1.7e-73 279.6 194 72.7
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 2.9e-73 278.9 197 70.1
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 3.8e-73 278.5 195 72.8
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 5.0e-73 278.1 196 71.9
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 6.6e-73 277.7 190 71.1
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.6e-73 277.7 189 74.6
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 6.6e-73 277.7 193 73.6
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.5e-72 276.6 193 74.1
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 1.9e-72 276.2 192 74.0
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.9e-72 276.2 192 71.9
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 1.9e-72 276.2 193 74.6
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.5e-72 275.8 196 73.0
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 2.5e-72 275.8 195 72.8
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 2.5e-72 275.8 196 73.0
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 2.5e-72 275.8 192 70.3
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 9.5e-72 273.9 193 74.1
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 9.5e-72 273.9 196 70.4
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 9.5e-72 273.9 198 73.2
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.6e-71 273.1 194 70.1
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 2.8e-71 272.3 195 70.3
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.6e-71 271.9 197 72.1
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 3.6e-71 271.9 193 69.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 3.6e-71 271.9 200 69.5
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 8.0e-71 270.8 192 70.3
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.0e-70 270.4 201 70.1
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.0e-70 270.4 202 69.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.4e-70 270.0 193 71.0
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.8e-70 269.6 189 71.4
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.8e-70 269.6 195 70.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.1e-70 268.9 217 67.7
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 4.0e-70 268.5 199 68.8
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 5.2e-70 268.1 196 69.4
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 5.2e-70 268.1 196 69.4
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 8.9e-70 267.3 196 69.9
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 8.9e-70 267.3 192 71.4
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 9.8e-69 263.8 168 78.6
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.3e-68 263.5 202 68.3
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 1.9e-67 259.6 176 73.9
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 2.4e-67 259.2 189 69.8
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.4e-67 259.2 192 68.2
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 9.2e-67 257.3 195 67.2
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 1.2e-66 256.9 193 69.9
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 4.6e-66 255.0 176 72.7
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 5.0e-65 251.5 175 71.4
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 8.6e-65 250.8 207 64.3
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 1.5e-64 250.0 201 66.2
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.5e-64 250.0 172 72.1
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.9e-64 249.6 192 67.2
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.9e-64 249.6 187 67.4
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.9e-64 249.6 187 67.4
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.5e-64 249.2 205 64.4
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 3.3e-64 248.8 194 69.6
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 1.2e-63 246.9 198 65.2
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 2.8e-63 245.7 201 64.7
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 3.6e-63 245.4 201 64.7
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 3.6e-63 245.4 201 64.7
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 3.6e-63 245.4 201 64.7
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 3.6e-63 245.4 200 66.5
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 4.7e-63 245.0 198 64.6
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.1e-62 242.3 204 62.7
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 4.0e-62 241.9 204 62.3
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 4.0e-62 241.9 204 62.3
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 5.2e-62 241.5 198 64.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.4e-61 238.8 172 69.8
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 7.5e-61 237.7 195 66.2
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 9.8e-61 237.3 207 61.4
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 1.1e-59 233.8 188 64.9
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 3.5e-58 228.8 175 70.3
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.6e-58 228.4 157 73.2
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 7.8e-58 227.6 164 68.3
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 3.0e-57 225.7 204 60.3
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 1.4e-51 206.8 165 63.6
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.0e-49 200.7 188 60.1
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.4e-46 190.3 174 54.6
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 9.9e-45 184.1 145 66.9
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 6.4e-44 181.4 181 49.7
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.7e-42 176.0 105 77.1
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 3.5e-42 175.6 105 76.2
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.1e-40 170.6 175 50.9
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 7.3e-40 167.9 187 47.1
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.1e-39 166.4 173 53.8
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 9.9e-37 157.5 98 79.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.1e-31 139.8 170 50.0
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 3.1e-30 136.0 114 58.8
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 4.5e-21 105.5 131 45.8
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 3.9e-17 92.4 58 72.4
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.6e-13 79.7 63 63.5
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.1e-10 70.1 48 72.9
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 4.6e-10 68.9 56 66.1
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.8e-06 57.0 33 78.8


User provided reference genes

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