Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 3.6e-207 724.9 435 100.0
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 6.8e-57 225.7 513 38.8
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 3.5e-53 213.4 483 45.3
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 3.9e-52 209.9 476 43.7
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 2.3e-44 184.1 589 35.5
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 6.2e-42 176.0 249 49.4
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 4.0e-41 173.3 499 38.9
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 5.2e-41 172.9 365 38.1
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.9e-39 166.4 265 45.7
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 4.9e-39 166.4 246 47.2
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 1.2e-37 161.8 266 45.9
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.2e-37 161.8 247 46.6
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.2e-37 161.8 250 47.6
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.1e-37 161.0 253 44.3
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.7e-37 160.6 254 45.7
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 6.0e-37 159.5 247 46.6
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 6.0e-37 159.5 257 45.1
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.0e-36 158.7 257 42.8
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.3e-36 158.3 253 43.5
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.3e-36 158.3 253 43.5
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.3e-36 158.3 257 42.8
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 5.1e-36 156.4 252 46.0
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 4.3e-35 153.3 255 46.7
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.3e-35 153.3 249 42.6
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 9.6e-35 152.1 253 44.7
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 2.1e-34 151.0 256 41.4
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 2.1e-34 151.0 244 45.1
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 3.6e-34 150.2 247 43.7
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 2.4e-33 147.5 327 38.2
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 3.1e-33 147.1 439 34.9
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 4.0e-33 146.7 450 39.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 9.0e-33 145.6 252 44.4
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.2e-32 145.2 442 35.7
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.4e-32 143.3 455 38.7
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 5.8e-32 142.9 316 35.1
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.7e-31 141.4 244 43.9
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 1.7e-31 141.4 244 46.3
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 2.2e-31 141.0 352 35.5
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 4.9e-31 139.8 239 43.1
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 8.4e-31 139.0 228 45.2
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 8.4e-31 139.0 233 42.9
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.4e-30 138.3 247 40.9
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 5.4e-30 136.3 244 41.8
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 7.1e-30 136.0 441 33.3
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 9.3e-30 135.6 237 41.8
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 9.3e-30 135.6 237 41.8
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 2.1e-29 134.4 243 42.8
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.3e-28 131.0 235 40.9
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.3e-28 131.0 254 40.2
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.9e-28 130.2 251 40.2
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 8.7e-28 129.0 232 41.8
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 8.7e-28 129.0 258 37.6
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 1.5e-27 128.3 310 36.1
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 1.5e-27 128.3 239 38.9
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.6e-26 124.8 232 44.4
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 3.6e-26 123.6 367 40.9
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 8.1e-26 122.5 494 31.2
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.1e-25 122.1 219 40.6
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.1e-25 122.1 244 42.2
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 1.4e-25 121.7 259 37.5
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 3.1e-25 120.6 493 36.1
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.2e-24 118.6 245 38.4
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 2.6e-24 117.5 254 39.8
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 4.5e-24 116.7 195 43.1
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 7.6e-24 115.9 245 37.1
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 7.6e-24 115.9 254 39.4
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 2.2e-23 114.4 233 43.3
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 3.8e-23 113.6 436 33.7
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 4.9e-23 113.2 226 44.7
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 4.9e-23 113.2 216 41.2
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.4e-22 111.7 251 39.0
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.4e-22 110.9 366 31.7
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 4.2e-22 110.2 209 40.7
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.6e-21 108.2 247 36.4
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.0e-20 105.5 402 37.8
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 1.3e-20 105.1 446 32.1
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 1.3e-20 105.1 200 40.5
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 9.6e-19 99.0 246 36.6
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 9.6e-19 99.0 246 36.6
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 9.6e-19 99.0 322 33.9
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.3e-18 98.6 250 34.8
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 1.6e-18 98.2 246 36.6
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 2.1e-18 97.8 246 36.2
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 2.1e-18 97.8 206 39.3
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 4.8e-18 96.7 239 36.4
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 2.4e-17 94.4 215 37.7
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.5e-16 91.7 232 37.9
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.4e-14 85.1 245 34.3
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 3.2e-14 84.0 221 36.7
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 4.2e-14 83.6 95 52.6
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 1.2e-13 82.0 202 35.6
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.6e-13 81.6 201 34.3
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 2.1e-13 81.3 201 37.3
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 2.1e-13 81.3 95 51.6
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 3.5e-13 80.5 197 37.1
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.8e-12 78.2 100 43.0
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 1.1e-11 75.5 251 35.1
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.9e-11 74.7 211 35.1
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 4.3e-11 73.6 67 62.7
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 2.4e-09 67.8 87 51.7
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 4.1e-09 67.0 207 36.2
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 2.0e-08 64.7 65 55.4
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 5.9e-08 63.2 244 30.7
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 6.5e-07 59.7 135 34.8


User provided reference genes

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