Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 4.6e-133 478.0 261 100.0
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 6.3e-58 228.4 250 55.6
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 1.0e-55 221.1 249 53.4
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 5.5e-54 215.3 254 52.4
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 7.2e-54 214.9 248 51.6
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 6.1e-53 211.8 248 52.4
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 6.1e-53 211.8 240 52.5
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.4e-52 210.7 239 54.8
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.4e-52 210.7 255 51.4
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.8e-52 210.3 249 54.6
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.0e-52 209.5 261 51.0
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.0e-52 209.1 254 49.6
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.2e-52 208.8 251 51.8
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 2.0e-51 206.8 258 49.2
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 5.7e-51 205.3 248 50.4
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 9.8e-51 204.5 235 53.2
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.2e-50 203.4 249 50.6
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 2.2e-50 203.4 244 49.2
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 2.8e-50 203.0 226 54.4
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 3.7e-50 202.6 245 52.2
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 3.7e-50 202.6 245 51.8
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 3.7e-50 202.6 249 51.0
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 4.8e-50 202.2 220 55.0
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 8.3e-50 201.4 244 52.0
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.4e-49 200.7 254 50.0
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 4.1e-49 199.1 239 51.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 7.0e-49 198.4 240 51.7
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 7.0e-49 198.4 221 52.0
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 1.2e-48 197.6 229 50.7
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 1.6e-48 197.2 240 52.5
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 2.7e-48 196.4 206 56.8
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 3.5e-48 196.1 245 48.2
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 2.2e-47 193.4 231 51.5
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 2.2e-47 193.4 220 52.7
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 3.8e-47 192.6 248 49.2
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 3.8e-47 192.6 248 48.0
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 5.0e-47 192.2 249 49.0
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 3.2e-46 189.5 226 51.3
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 5.5e-46 188.7 245 50.2
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 7.2e-46 188.3 244 48.4
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 7.2e-46 188.3 260 45.8
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 9.4e-46 188.0 236 49.2
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 1.2e-45 187.6 212 52.4
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 2.7e-45 186.4 239 51.0
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 3.6e-45 186.0 239 48.5
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 8.0e-45 184.9 233 49.8
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 1.0e-44 184.5 226 50.9
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 2.3e-44 183.3 226 50.0
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 4.0e-44 182.6 213 52.1
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 6.8e-44 181.8 225 49.3
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 8.8e-44 181.4 225 50.2
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 1.2e-43 181.0 233 48.5
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.2e-43 181.0 245 46.5
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.5e-43 180.6 244 47.5
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 2.0e-43 180.3 243 48.6
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.0e-43 180.3 261 46.0
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 9.8e-43 177.9 243 48.6
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 9.8e-43 177.9 233 48.1
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 2.2e-42 176.8 242 46.7
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 2.8e-42 176.4 264 47.3
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 3.7e-42 176.0 242 47.9
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 8.3e-42 174.9 213 50.2
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 1.1e-41 174.5 224 48.2
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 1.8e-41 173.7 314 40.1
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 1.8e-41 173.7 232 49.1
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 4.1e-41 172.6 225 47.6
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 5.4e-41 172.2 260 44.2
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 5.4e-41 172.2 249 44.2
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 5.4e-41 172.2 221 46.2
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 7.0e-41 171.8 257 44.4
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.2e-40 171.0 194 53.6
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.2e-40 171.0 229 45.4
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.0e-39 167.9 235 43.0
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.7e-39 167.2 225 48.0
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 6.6e-39 165.2 235 43.0
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 6.6e-39 165.2 243 42.8
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 1.1e-38 164.5 223 45.7
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.3e-38 162.9 235 42.6
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.6e-37 160.6 234 44.9
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.6e-37 160.6 224 46.9
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 2.8e-37 159.8 238 44.5
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.8e-37 159.8 213 45.1
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 3.6e-37 159.5 229 42.8
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 4.7e-37 159.1 240 42.1
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 8.0e-37 158.3 249 43.0
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 1.4e-36 157.5 223 45.3
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.8e-36 157.1 237 43.9
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 1.8e-36 157.1 219 43.4
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 3.0e-36 156.4 194 49.5
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 3.4e-35 152.9 208 46.6
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 5.7e-35 152.1 256 42.2
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 1.3e-34 151.0 237 43.9
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 1.7e-34 150.6 241 43.2
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.2e-34 150.2 253 41.1
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 3.7e-34 149.4 245 43.7
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 3.7e-34 149.4 245 43.7
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 4.9e-34 149.1 216 46.8
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 4.9e-34 149.1 241 43.6
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 8.3e-34 148.3 258 43.0
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 1.1e-33 147.9 251 43.0
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-33 147.5 247 42.9
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-33 147.5 244 41.0
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 1.8e-33 147.1 227 44.5
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 5.4e-33 145.6 223 39.5
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.2e-32 144.4 247 40.5
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 4.6e-32 142.5 229 41.9
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 4.6e-32 142.5 229 41.9
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 2.3e-31 140.2 247 42.1
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 3.9e-31 139.4 238 42.4
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 3.9e-31 139.4 238 41.2
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 8.6e-31 138.3 203 47.3
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 4.3e-30 136.0 212 42.5
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 1.2e-29 134.4 238 40.3
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.8e-29 133.3 237 40.1
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 2.8e-29 133.3 120 60.8
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.8e-28 130.6 245 41.6
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 3.4e-27 126.3 236 38.6
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 3.4e-27 126.3 236 38.6
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 3.4e-27 126.3 236 38.6
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.9e-26 123.2 215 42.3
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 3.7e-26 122.9 131 58.8
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 6.4e-26 122.1 229 38.9
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 9.2e-25 118.2 185 43.2
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 2.0e-24 117.1 116 57.8
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 8.6e-23 111.7 152 48.0
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 1.1e-22 111.3 91 68.1
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 1.1e-22 111.3 243 34.6
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.5e-22 110.9 219 39.7
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 7.3e-22 108.6 224 38.4
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 1.6e-21 107.5 201 38.3
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.6e-21 106.3 236 37.3
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 8.1e-21 105.1 253 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 4.6e-16 89.4 176 34.1
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 6.6e-15 85.5 147 40.1
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 6.6e-15 85.5 97 52.6
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 4.3e-14 82.8 178 31.5
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 9.5e-14 81.6 140 41.4
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.2e-13 81.3 85 55.3
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.4e-12 77.8 177 34.5
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.2e-11 74.7 97 46.4
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 1.5e-11 74.3 98 36.7
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 2.0e-11 73.9 140 40.0
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 3.4e-11 73.2 103 36.9
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 3.4e-11 73.2 81 51.9
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 1.3e-10 71.2 112 42.9
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 3.2e-09 66.6 71 49.3
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 7.1e-09 65.5 137 35.8
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 3.5e-08 63.2 43 69.8
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 7.8e-08 62.0 56 50.0


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