Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 3.1e-284 981.1 493 100.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 8.1e-256 886.7 476 93.3
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 2.2e-253 878.6 476 92.2
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 3.9e-250 867.8 476 91.8
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 3.4e-246 854.7 476 90.1
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 7.6e-246 853.6 476 89.3
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 2.2e-245 852.0 476 90.5
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 3.8e-245 851.3 476 90.5
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 6.4e-245 850.5 490 87.6
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.4e-244 849.4 476 88.9
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.4e-244 849.4 476 88.9
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 2.4e-244 848.6 471 89.6
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 4.1e-244 847.8 476 88.7
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 9.2e-244 846.7 478 89.5
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 9.2e-244 846.7 476 89.1
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 1.6e-243 845.9 476 89.1
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 6.0e-243 844.0 476 89.3
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 1.7e-242 842.4 476 88.7
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 3.9e-242 841.3 458 91.7
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 6.6e-242 840.5 483 87.4
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 8.7e-242 840.1 484 87.8
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 8.7e-242 840.1 476 88.4
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 3.3e-241 838.2 476 87.6
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 3.3e-241 838.2 476 87.6
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 4.3e-241 837.8 475 88.4
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 5.6e-241 837.4 476 89.1
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 1.6e-240 835.9 476 88.7
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 4.7e-240 834.3 476 88.2
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 1.1e-239 833.2 476 88.4
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 1.8e-239 832.4 476 87.8
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 1.8e-239 832.4 476 88.7
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 5.2e-239 830.9 476 88.0
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 6.9e-239 830.5 476 88.0
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 9.0e-239 830.1 476 88.2
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.0e-239 830.1 478 87.9
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 1.2e-238 829.7 476 87.8
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 1.5e-238 829.3 475 88.2
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 2.0e-238 828.9 540 78.5
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 2.6e-238 828.6 476 87.6
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 3.4e-238 828.2 476 88.0
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 3.4e-238 828.2 476 88.0
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 5.8e-238 827.4 476 87.4
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 2.2e-237 825.5 485 86.4
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.2e-237 825.5 476 88.0
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 2.9e-237 825.1 482 86.9
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 3.8e-237 824.7 480 87.3
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.8e-237 824.7 479 87.7
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 4.9e-237 824.3 480 87.1
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 4.9e-237 824.3 486 86.0
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 6.4e-237 823.9 483 86.5
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 1.1e-236 823.2 476 88.4
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 1.1e-236 823.2 476 85.9
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 1.4e-236 822.8 471 87.5
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 1.9e-236 822.4 476 86.8
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.2e-236 821.6 489 85.9
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 9.3e-236 820.1 483 86.1
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 1.6e-235 819.3 479 87.1
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 2.7e-235 818.5 476 87.0
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 4.6e-235 817.8 476 85.5
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 4.6e-235 817.8 483 85.9
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 4.6e-235 817.8 492 84.8
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 1.9e-233 812.4 476 86.6
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 1.9e-233 812.4 471 87.3
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 2.5e-233 812.0 476 86.1
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 3.3e-233 811.6 488 85.0
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 7.3e-233 810.4 513 81.5
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 1.3e-232 809.7 476 85.5
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 2.1e-232 808.9 476 84.7
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 2.4e-231 805.4 488 84.0
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 3.4e-230 801.6 488 83.4
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.8e-226 789.3 470 85.7
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 5.6e-225 784.3 456 87.1
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 7.4e-225 783.9 471 84.9
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 9.6e-225 783.5 502 81.1
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 2.6e-222 775.4 476 81.5
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 4.5e-222 774.6 471 83.7
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 6.0e-219 764.2 474 83.1
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 1.1e-217 760.0 481 81.9
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 1.7e-213 746.1 471 80.7
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 2.9e-213 745.3 476 78.6
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 3.4e-206 721.8 470 79.6
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 6.9e-191 671.0 401 85.3
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 5.3e-183 644.8 496 71.0
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 1.3e-176 623.6 484 67.4
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.3e-168 597.0 488 64.3
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 2.2e-168 596.3 501 61.3
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 3.1e-167 592.4 405 75.3
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 5.4e-167 591.7 488 60.9
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 6.8e-162 574.7 352 83.0
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 2.0e-161 573.2 472 62.1
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 3.5e-158 562.4 471 61.8
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 8.6e-157 557.8 456 66.0
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 4.3e-148 528.9 369 70.5
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 8.1e-131 471.5 256 93.8
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 2.2e-128 463.4 249 94.4
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 3.8e-128 462.6 249 95.2
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 6.4e-128 461.8 249 94.4
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 2.1e-126 456.8 249 94.4
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 3.5e-126 456.1 473 51.8
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 3.9e-125 452.6 249 92.4
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 2.0e-121 440.3 249 90.4
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 4.4e-121 439.1 316 75.0
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 3.4e-113 412.9 249 85.9
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 3.8e-112 409.5 231 91.3
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.3e-109 401.0 479 45.3
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 2.5e-108 396.7 249 83.1
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 1.2e-105 387.9 223 85.2
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 8.4e-104 381.7 222 84.2
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.7e-96 357.5 193 88.1
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 1.8e-90 337.4 196 84.2
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 3.4e-89 333.2 196 84.2
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 3.8e-88 329.7 221 70.6
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 6.5e-88 328.9 194 83.0
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 1.9e-87 327.4 187 82.9
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 8.5e-80 302.0 196 75.0
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 8.8e-77 292.0 201 79.6
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 2.9e-72 276.9 242 60.7
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 2.0e-68 264.2 193 67.9
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 5.7e-68 262.7 214 62.1
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.2e-67 260.8 184 76.6
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 5.0e-64 249.6 249 55.4
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 1.7e-51 208.0 140 80.7
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.3e-35 155.2 107 69.2
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.7e-35 154.8 128 68.0
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 9.2e-26 122.5 91 70.3
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 7.8e-25 119.4 63 87.3
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 3.0e-24 117.5 60 95.0
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 4.7e-22 110.2 58 94.8
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 2.7e-09 67.8 142 35.2
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 3.5e-09 67.4 36 94.4
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 3.3e-07 60.8 32 78.1


User provided reference genes

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